Gene detail

Detailed information of ANN18831-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:24003031...24059139
NR annotation: CAH3025200.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN18831-RA

ATGGACACTCTTTCATTTTCCAGCCAAAAGCATGCCATTGAAGCAGCATGGGCTGCAGTTGATGATCTACTCAATCCCAGCAGTCCTGTGGAAGCTCGGCATGTCACTCTCCAATTTCTCACTGTGATGGTGTCTGCGCAGTTCAACAGACTTGGCATTTTAAGGGCTCATTTCTTCTCTGTTGTGGCTAATCACAAGATTCCTGAGGACGTCACACCCAGGTTGGAATTGTTGAAGGCTCTGAGTGATAATGGAAAAGACATCTCTTACTTTGAAGAAATGACAGGACCTTTTCTACTGTCATGGATGCCAGAAGTTATGCAAAAAGGAAGGATGGACGTTTTTATGCCACTTGTGATAAATGTTATTCACTACAACTCCAGTTTTCTTGACGAGGACATCATAACGGGTATTGTTAGGGAGACTTGCCGTTTATCAAGAACAACCAAAGAAGAAGAAGACGTGGAGCTGTGCCTGTGTCTGTTGGATGCTGTGGTTCGTTACAGCTGTCTGCCATCCAATGCCTTGTTTGAGTTCATTGCCACTGCCTGTCGAGCTGTCAACATTGAAAAGTTCTGTCAACACAGCTGGAAGATAATGCGAAATTTACTTGGGACCCATCTTGGACACAGTGGAGTGTATACTATGTGTAATGTTATGGAAGACAGTGACAATGGCTCAGATGTCTTGCTGCTGCGAGGTTCAGTGTTTTTCATCGGAATGTGTTTATGGGGCTCACAGAGAGTGCCTAATCTCAAGTATTCCAACTCAACTGTTTTGCCGTCTATGTTGCAAGCTCTTTCTTGCCATCACAGTTTAGTGGCCTTGGAAGTGACACTCTCTGTTCAAAGGCTGGTGAAGAAGTACGGTCACGAGCTTCATGTTGTGGCCTGGGATGCTTTGTTAGACATAGCTGAGGCACTACAACAGCAGATTGAGCAATATTCCCCAGGTGACAAGGCCTTGATAGAAAACCTTAACATCTTGTTGTCCAGCATAGAAGAACTTTACGAGACTGGCAAGTTTAACGGACCGGAAGAAAGGTTTTTCGCTATAGTGGAGAAGACTGCCAGTGTGAGACCAGAGCGATCTCTTCATATCCTAGTGTCATTCAAGGCTCAAACAGTGCACCCTGCACAAGTAGGGTGGCTTGCAAACCTTCACAATCTCATGGAGAAATACTTCAGGTATGAAATCCGCACCAGCGTGAGAGTAAAAGTTCTCAATGTCCTGTCTTCCTTGCTTACGTCATACGGACACTGGTTTGAGGAAGAGCTTTTAGAGTCGGCAGTGTTGCCGTACTTGAACCACATATCTGAAGACCAGGATGTAACCGTGCGCAATGAAGCAGTGCAAATACTTATTGACTTGTGTCAGATGTGTGACTCTCAGAAGTGTCAGAATTTCCTGGACATCATTGAGAAGGTGATCAGTAAGCATGTTGAGCTCCAAGGAAAAAGCCCTCCACTCGAGCAACATCAGCAGATGGCACAAGAAGAAAAAGAGTTAAAAGATGTCAAGACTGCAGTCAATGGATTGGTGGAGGTTTTTAAGCTCAAGTTGTTCCGCTTGCCTCATGGTCATGCTGTCAGAACCTTTGAACTGTTGGTCTCGCACATGAAAGCCCATTATTACCATGGTTACAGCACCGACATTGCCAGTGTCATCAGAAACTTGGCATTTGAGTGCTTCCTTAGGCTGAGGTGTGACTCCAGTTTACGACTCGGTTTATGCGCCTCTGCAGAAGAGGAGACCAGTACAAAGTTCAGTCCGTACTTTACTTGTTGGCACAGTGATTCCGACACCAAACCATCGTCACATCTTGCCGTTATACACTACTCGGAAGTGTTTGAAGTTATCTTGAACTGTCTACAATATGAGTGGGACTGGAACGTACTAGAACATGTATTAACAGCGCTACCTGAGGTCCTGCAAAATAAGAGTCTGATACTGTCAGCTAATCCTGCATTGAACACGATGACGCAAGTGCTCTGCCATATGGTTTCAGAGCCTTCGTGTATCATTGATCTCCGTCGCGTTCCTCATGGTGTTGGTAGAATAGGATTGCAGTCTTTGATATTTCCTCACCCCGCTAATTCTAGATGGCGCTGTGTCATCGCGTCACATCTACAGACACTGGCGTTTATGCATGTAGGTATGACGCGTTTTTGCAGACAATGGTTTTCGTCACCTGACAAGCTAGCCGGCGGTTTGAGCAAGATTGTCATGGCGGAGTCCGCTCCAAGATTCGCGTCAGTCTCAGAAGCGGATTTAGGACGCCTTGTTGACGACAAGGACGCAAAGAACACCAAACGAGCTACCAAGACAGCTCTTAGAGTTTTACAGCAGTATTTGAAGGAGAAGAAAGTTCCCGAACCGCAAACCAAAGATGGCATCAGTAACGTTCTCAAACTATTTTATGCCGAAGCTAGAAAAGTCGATGGAACTTCTTATTCCAAAAGCACTCTCAACAGCCTGAGATTTGGACTGGGCAGACACTTCAAGGCGACTCTTGGCTTCGATATAATAAACGATCCAGCATTTGCCGAGGCAAACAAAATTTTTGGCGCCAAGTGCGTTGAACTAAAACGACAAGGGCTCGCCAAAGTCGAACACACGCCACCGATCTGCGAAGAAGATCTTAAAAAGCTGTACGAAAGCGATGTTTTTAACCAAAACAGCCCGGAAACGCTTCAAAACAAAGTTTTTTTCGAGGTTATGTTGTACTTTTGTCGCCGAGGAAGGCAAAATCTTCGTGAACTCAAAAAAGCTGATTTTTCATTCAGCACGGATGGCAAAGGTGCAAAATATGTGTGCAAAACAACAGATGAACTCACAAAGAACCGACGAGAAAATGATGAAGGATTTGAAGGAGGCGTGATGTTCGAGAAACCAGGACCACACTGTCCTGTGGCTTCATTTGAACGGTACATACAGCACCTGAATCCCTCAAACGAATTTTTGTTTCAGCGGCCGAAGAAAAACGCCGGCATATCTGATCAAGTGTGGTACGATAACATGGTTGTCGGAGAGCGTTTGCTCGGTGAAAAAATGAAAAGGATCTCTCGAGAAGCCAAACTTTCAAAGTGTTACACCAATAACTCGATCAGGGCAACGGCGGCTACAATCCTGGACAAATCAGGGTTCGAAGCAAGGCATATCATGGCGGTGAGCGGGCACAGAAATGAATCCAGCATTCGGAGCTATAGCAGGACTGACATTTCAACCAAGAGAAAAATGTCGGAAACCCTGACGACAGAGTGCGAGGTTTTAACAGTTCTTGCCACTTACCACTCCAGTTTGGACAGGGGCAGACAGTTTGAATTGGTGAGGACTTTAGAGCTTGGTCTAGTCACCAAGTGTGCTGTGCTGTGTGTTTCGTCTTTGACTTTGTGCACCATGGAAATGCAGGCAGTCATGAAAAGTCTTCTCCCAGCTCTTTTAGTTCGCTTGACCCAGATCTCTGCCACGGTTTCCATGGCAGCCCCAATGCTGGAGTTCCTCTCAGGACTGGTTCATTTGCCTCATTTGTACGCCAGTTTTCAAGACAGTCAGTACAAAAGCGTGTTTGCTATTTGTCTGCCGTACACTGATCCATTCAAGTATTCTCAGTACACTGTGACCCTTGCCTACCACGTGATTGCTGCGTGGTTTGTTCGATCACGTGTGGCTTACCGCAAAGCATTTGTAGGATTTGTGAGTAAGGGTCTTAAATCAAGTGCTATAATCCCGGACCGTTATGACTCCAGACCAGACAGCCCCGCGTTAGCAGCAGCCAGATCCCAAAGTGGTGGCATGAGCAGTCAACCCTCGCCCCAGATCGTTCATCGGTCGATTTCACCCGTTAGTTACAAAGAGACTGAGGCAGCATGTGAGCTGCATGCTGAGATGAGTGAGGTGTGCATGGACATGATGGCAAGATATACGTTTGCTCCGTGTATGTCGCAACCAAACAGGACTAAAGCTGTGGAGTTCATGCTGGCCAGCGGTCACTCACGAACGTGGATGATTAGTAATACTATCGTAACAATAACCACATCCGGGACCTACATCGGTCTGGACGGAGTGTGTGATAACTGCCTTGCGCTGCGAGAGAGAAAAGCGAACATTGAACTCAAAGAAAAAGATAAAGTAGAGAAAAGTGTGAAGCAGAGAAGCAATGCAGTGGATGACTCGACAGACTCTACCCAGGCGCCAAGCGACCACACACATGGCGCGGTTACTAGCCTGGTGACTAGTACTCAGGCCTCTGCAAGTTCTCTGACAAACACTGGCGTATCTTTGAAGCCTGAAAACAAATTCACGAGTCTGGAGAAAACAGCCCTTCATAAGTCTCACTCAGTTGACACTGCAAAGCTGAAATCCATGTCAGAAGCTCGCGCTAGCATCGCCTCTGAGCGAAGACTCAGCGAGCCTCTTGTATCTGTTAGTCCTCAGAATTGCCAGTGTGTTTGCCAAGGCTGGGCAGAGATTTTCATTCGGCGACCCAGCGGCAATATCTCTTGGATCATGCGCATTCAGAACCGAAATACGTCATCGAGTTTAGATGGTGACATCAGCATGGCTGTTGTGGATGATCCTAATATTGGGGAATCTTTAACTCCCTACAGTGAAAAGCACGCGGAGATCCTGAGTAGAAGTACGGAGAGTGGATCGGTTATTGTCGATGTGGTCAGGCAAACCAATCCCTCAGACGCAGCCTTAGATTCTTCCAGTTCTACCTGCCAGCTGGGCCACACTGAAGAAGACAACACCCTCGAGCCACCTCAGCTAGACCCAGTCCTCATCTACACCCCAACCGGAAGCACGGACTCTCCCCAGAGTACTTCAGCGGGGTCCATTGATTCCGAGTCCTATGAAGGAAGGGACAGGCTCCTTAGCAGGAGCCCGAGAAAGAAACCAAATGTCTTTACAATGAGAGAGTCGGAGTTCTCTGACTTAGCAGGAAGCTTTGAAACCACTCCCACTGAAGATGTAGCGCTGAATAAGAGCAGAAATGGACTGTACTTTGAAAAGCCTGAGCTTGGAGTGTCCCCTGCTGAACGTTTACCAGTTTCGTCTCTGCCAGGACAGAGCCATTGGGAGCAAACCAGAAGAACAGAAACTAAATATCTATCATCATCCGAGATGTATCGGCTCGCCAGTGATGAAGAGAGTGTACAGTCGCTGAATATTGAAGACCACGAGGACCATACCGGAGAACAAAAGGTGGAACAGGCAGATAAAGATCATCCTGTACAGCATGCCATCACTCCAGCAAAAAAGGTCGAGAGACCGAAGTCATTGCCCTTTCATTCCCTCAACGTTGACCCACCAGTCATTCGAGAAAGCCCTGAGTTCGCTATAGGCAAGGTCTTTGGTGATCAGGACAAAACTGCTTTCACTGCGAGTCTTGATTCGGGTTCAAACAATGTTCGGCAGCTTCCAGGACCCTCGCATTCACCTAAGCCACGAGGAGCCTCTGGGGGCCAAGACAATAGCTCCCAGGCCCCCAAGAAAGCCAAGCTGAAGAAGTCTTCCAGCATAAGTTCACCAATCAGAAACAGGAGAGACTTGGATCACTCGGCCCACTCCCCATTCACGTCCCCCCGCCAGGGAAGAAGTGCAATGGCCGTGAAAAGTAAGGAGGCTGAAGACAGGCACGGTTACCTGGCTATCCTCGGAGATCCGAAGAAGAGCTCGTCTTCACCGGAGTTGTCTTCGCCGCCCGCTATCCCGAAAGTGGCAGCATTTCGTAAAACTGAAGCCACAAAGCGGCGGACCTCTCGCACCAGAATGGTGCCCTACACAGGAGGACCTCAGTCCATAAACAAGTCTTCAAAATCAGCCCCATTATTAGGCGACGTCCCAGACACAGGGCCCAAAGAGCCCCCAATACTGGTGACCCCATCAGAATCGTTCAGGTACCCTTTGGACCCCTGTTTTGTGTTCCTACAGCTGTATCATGCCTCATTCTTGGGGCCATCTCACGAGAAACCTCAGCCCCTACCTGAAAGCGAGGTGATTGAACGAGCCATCAAGTGCCTGGACCGCATCCCACCCTATGATACACACAAGATTGGAGTCATCTATATTGGACCTGGGCAACACGACAACGAAGCTGCAATTTTGCGTAATGTATACGGATCATCCCGCTACATGGCGTTTCTTGCGGGACTCGGGACGCTTGTTCGACTGAGGGACTGCCCGCCTGCCGAGATCTACACTGGGGGACTGGACAGGAATGGCGCGGACGGTGAATTTGCGTACAGTTGGCAGGATGATATCTGTCAAGTTATTTTCCATGTCGCCACACTGATGCCAACCCGTGAATCGGATCCAGGTTGCAACTCCAAAAAAATGCACATTGGGAACGACTTTGTTACCATCGTCTACAATGACTCGCAGCAGACAGTCAAGTTTGGTACAATTAAGGGTCAGTTCAATTTTGCTGAAGTGCTTATTAAACCGCTTGACAATGCATCTAATATGGTGACCCTGAGGTTCAAGGACGAGCTGAAGGATTTGCTGACAGACACAGGACCACGAGTCATCTCTGACGTTAACCTTCCTCGCTTGGTGCGGCAGCTGGTTGTTCATATCAACATGGCATCGGTTATTCACCAAAGTCAAAAGAGACCTACAGACGCTTATGGGTGTAACTGGCTCGAAAGATTGCGTCAGATTAAACGCGTGCGCAGTAAAGCGGTGGCAGAGAACTTCTCAGTTCCCACTAGCCCTCTTGGGAAAGTATCTCCGTCACCTGGGCTGCGCCCGACATCTCTCCAGAGCACAGGTCTCACAGACTTCACTGAGTACATCATGAAGTAG

Transcript

ANN18831-RA

Protein

ANN18831-RA

MDTLSFSSQKHAIEAAWAAVDDLLNPSSPVEARHVTLQFLTVMVSAQFNRLGILRAHFFSVVANHKIPEDVTPRLELLKALSDNGKDISYFEEMTGPFLLSWMPEVMQKGRMDVFMPLVINVIHYNSSFLDEDIITGIVRETCRLSRTTKEEEDVELCLCLLDAVVRYSCLPSNALFEFIATACRAVNIEKFCQHSWKIMRNLLGTHLGHSGVYTMCNVMEDSDNGSDVLLLRGSVFFIGMCLWGSQRVPNLKYSNSTVLPSMLQALSCHHSLVALEVTLSVQRLVKKYGHELHVVAWDALLDIAEALQQQIEQYSPGDKALIENLNILLSSIEELYETGKFNGPEERFFAIVEKTASVRPERSLHILVSFKAQTVHPAQVGWLANLHNLMEKYFRYEIRTSVRVKVLNVLSSLLTSYGHWFEEELLESAVLPYLNHISEDQDVTVRNEAVQILIDLCQMCDSQKCQNFLDIIEKVISKHVELQGKSPPLEQHQQMAQEEKELKDVKTAVNGLVEVFKLKLFRLPHGHAVRTFELLVSHMKAHYYHGYSTDIASVIRNLAFECFLRLRCDSSLRLGLCASAEEETSTKFSPYFTCWHSDSDTKPSSHLAVIHYSEVFEVILNCLQYEWDWNVLEHVLTALPEVLQNKSLILSANPALNTMTQVLCHMVSEPSCIIDLRRVPHGVGRIGLQSLIFPHPANSRWRCVIASHLQTLAFMHVGMTRFCRQWFSSPDKLAGGLSKIVMAESAPRFASVSEADLGRLVDDKDAKNTKRATKTALRVLQQYLKEKKVPEPQTKDGISNVLKLFYAEARKVDGTSYSKSTLNSLRFGLGRHFKATLGFDIINDPAFAEANKIFGAKCVELKRQGLAKVEHTPPICEEDLKKLYESDVFNQNSPETLQNKVFFEVMLYFCRRGRQNLRELKKADFSFSTDGKGAKYVCKTTDELTKNRRENDEGFEGGVMFEKPGPHCPVASFERYIQHLNPSNEFLFQRPKKNAGISDQVWYDNMVVGERLLGEKMKRISREAKLSKCYTNNSIRATAATILDKSGFEARHIMAVSGHRNESSIRSYSRTDISTKRKMSETLTTECEVLTVLATYHSSLDRGRQFELVRTLELGLVTKCAVLCVSSLTLCTMEMQAVMKSLLPALLVRLTQISATVSMAAPMLEFLSGLVHLPHLYASFQDSQYKSVFAICLPYTDPFKYSQYTVTLAYHVIAAWFVRSRVAYRKAFVGFVSKGLKSSAIIPDRYDSRPDSPALAAARSQSGGMSSQPSPQIVHRSISPVSYKETEAACELHAEMSEVCMDMMARYTFAPCMSQPNRTKAVEFMLASGHSRTWMISNTIVTITTSGTYIGLDGVCDNCLALRERKANIELKEKDKVEKSVKQRSNAVDDSTDSTQAPSDHTHGAVTSLVTSTQASASSLTNTGVSLKPENKFTSLEKTALHKSHSVDTAKLKSMSEARASIASERRLSEPLVSVSPQNCQCVCQGWAEIFIRRPSGNISWIMRIQNRNTSSSLDGDISMAVVDDPNIGESLTPYSEKHAEILSRSTESGSVIVDVVRQTNPSDAALDSSSSTCQLGHTEEDNTLEPPQLDPVLIYTPTGSTDSPQSTSAGSIDSESYEGRDRLLSRSPRKKPNVFTMRESEFSDLAGSFETTPTEDVALNKSRNGLYFEKPELGVSPAERLPVSSLPGQSHWEQTRRTETKYLSSSEMYRLASDEESVQSLNIEDHEDHTGEQKVEQADKDHPVQHAITPAKKVERPKSLPFHSLNVDPPVIRESPEFAIGKVFGDQDKTAFTASLDSGSNNVRQLPGPSHSPKPRGASGGQDNSSQAPKKAKLKKSSSISSPIRNRRDLDHSAHSPFTSPRQGRSAMAVKSKEAEDRHGYLAILGDPKKSSSSPELSSPPAIPKVAAFRKTEATKRRTSRTRMVPYTGGPQSINKSSKSAPLLGDVPDTGPKEPPILVTPSESFRYPLDPCFVFLQLYHASFLGPSHEKPQPLPESEVIERAIKCLDRIPPYDTHKIGVIYIGPGQHDNEAAILRNVYGSSRYMAFLAGLGTLVRLRDCPPAEIYTGGLDRNGADGEFAYSWQDDICQVIFHVATLMPTRESDPGCNSKKMHIGNDFVTIVYNDSQQTVKFGTIKGQFNFAEVLIKPLDNASNMVTLRFKDELKDLLTDTGPRVISDVNLPRLVRQLVVHINMASVIHQSQKRPTDAYGCNWLERLRQIKRVRSKAVAENFSVPTSPLGKVSPSPGLRPTSLQSTGLTDFTEYIMK

Uniprot

Uniprot term	Description
P49815	Tuberin OS=Homo sapiens OX=9606 GN=TSC2 PE=1 SV=2
P49816	Tuberin OS=Rattus norvegicus OX=10116 GN=Tsc2 PE=1 SV=1
Q61037	Tuberin OS=Mus musculus OX=10090 GN=Tsc2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12012	DUF3504	Domain of unknown function (DUF3504)	Family	Interproscan
PF03542	Tuberin	Tuberin	Family	Interproscan
PF11864	DUF3384	Domain of unknown function (DUF3384)	Family	Interproscan
PF02145	Rap_GAP	Rap/ran-GAP	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR021893	Domain	Domain of unknown function DUF3504	Interproscan
IPR018515	Domain	Tuberin-type domain	Interproscan
IPR021133	Repeat	HEAT, type 2	Interproscan
IPR027107	Family	Tuberin/Ral GTPase-activating protein subunit alpha	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR024584	Domain	Tuberin, N-terminal	Interproscan
IPR035974	Homologous_superfamily	Rap/Ran-GAP superfamily	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR003913	Family	Tuberin	Interproscan
IPR000331	Domain	Rap/Ran-GAP domain	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10063	TUBERIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0030178	Biological Process	negative regulation of Wnt signaling pathway	Interproscan
GO:0032007	Biological Process	negative regulation of TOR signaling	Interproscan
GO:0033596	Cellular Component	TSC1-TSC2 complex	Interproscan
GO:0046627	Biological Process	negative regulation of insulin receptor signaling pathway	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan
GO:0051898	Biological Process	negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction	Interproscan
GO:0051056	Biological Process	regulation of small GTPase mediated signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07207	TSC2; tuberous sclerosis 2	-	Protein phosphatases and associated proteins	ko01009	deepkoala