Detailed information of ANN18931-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:26220910...26224619
NR annotation: CAH3025346.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009220 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023
all species →		AnkAnkyrin repeatRepeatInterproscan
PF13637
all species →		Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF07525
all species →		SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR001496
all species →		DomainSOCS box domainInterproscan
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050842
all species →		FamilyCul2-RING E3 Ligase Substrate-Recognition Fem-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24173
all species →		ANKYRIN REPEAT CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10335ASB13; ankyrin repeat and SOCS box protein 13-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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