Detailed information of ANN18951-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:26424592...26425917
NR annotation: PFX33353.1, Arylsulfatase B [Stylophora pistillata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9P215Pogo transposable element with KRAB domain OS=Homo sapiens OX=9606 GN=POGK PE=1 SV=2
Q80TC5Pogo transposable element with KRAB domain OS=Mus musculus OX=10090 GN=Pogk PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000155 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09607
all species →		BrkDBDBrinker DNA-binding domainDomainInterproscan
PF03184
all species →		DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03221
all species →		HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050863
all species →		FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR018586
all species →		DomainBrinker DNA-binding domainInterproscan
IPR004875
all species →		DomainDDE superfamily endonuclease domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR006600
all species →		DomainHTH CenpB-type DNA-binding domainInterproscan
IPR010921
all species →		Homologous_superfamilyTrp repressor/replication initiatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303
all species →		TRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN18951-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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