Gene detail

Detailed information of ANN19008-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:26825739...26841311
NR annotation: XP_020609191.1, eukaryotic translation initiation factor 3 subunit D-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SMR1	Eukaryotic translation initiation factor 3 subunit D OS=Nematostella vectensis OX=45351 GN=v1g235689 PE=3 SV=1
Q3T122	Eukaryotic translation initiation factor 3 subunit D OS=Bos taurus OX=9913 GN=EIF3D PE=2 SV=1
O15371	Eukaryotic translation initiation factor 3 subunit D OS=Homo sapiens OX=9606 GN=EIF3D PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006560 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05091 all species →	eIF-3_zeta	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007783 all species →	Family	Eukaryotic translation initiation factor 3 subunit D	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12399 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005852 all species →	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03251	EIF3D; translation initiation factor 3 subunit D	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.