Gene detail

Detailed information of ANN19025-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:27110617...27185927
NR annotation: KAJ7390156.1, hypothetical protein OS493_026663 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN19025-RA

ATGGCATCGTCCTGGTGTAGTGAAAGTTTTGTTTCAGCTACAATGAATTTTCAACTTGAAGGCTCTAGATATGCCAAAGACATTTACAACTATGCCAGAAAAGCTGTTGATCCACAAGTCAGTTTGACTCGTTATGAAGTACCAAGAGCTGGCTTGTGCCTCTTTGCAAAACATGCTGCTCAGTTCAAGGAATACGTTGCTAAAGACTATGAGGATCTGTATGAAGTATTTTATCGCTGGTGCAAACATCATAACCGAGAGACGAGCTATGCTGGATATTTAGCCATGGATGCTTTTCTGAAGCAGATAGCAGAACATTTTGTTTCAAGAAGTGCTGATAAATCAGAAATGGTTATGTTTAAGTATTTTATCAAGAAATTCCGATCAATTATTGATTCCGCCTCCAGTGATACGAAACAAACATCAGTTGCAATACGAGGCTATGGCTACTTCTCAAAGCCCTGCAAATTGTTTATGCAAGCTGAAGATGTGAAGTTCATGTTTAGTGAGATGATGCAGAGGAGCGAGCAGATTTACCTCAGACAAGATGAACTGGTAGAAGACAAAGTCCAGCATCTTCCAAGCTTTCTTGAGGCATTGTCATGTATTGTTCAGGAGCTGGATGAGATTTCTGACTCTGTTCTTGCCTCTTTGGAGAAGCTAGTAGTGGTGTTATTCAACAATTTCACAAGGTTGGCCAAAGGGTCTAAGTTCCTCTGTTGTAAAGCCCTCATCAAAGTGCTGTTTAACCTTTCTGACAAAGGTTCAGTTCTCAGGAGATTTCTTTCTGAAGTAGTTTACCAGGGCCTCATTAGAACTTGTTCTCTTCCAGTTGCGTTAGATGAGGTAAATGAAATGACCGTAACCGGGGATGGTGAGGCAATGGATACTTCATCACCCAAAACATCATTTAAAGATTACTTGGAGCTTTGGGAATTCCTCTTAGAGAAGGGAAAGTTTAAGGATGTCAGCTTAGTTGGACAAAAACTTGAACAGCGTGAAAGCATGCATGGGATGGTGTATGATGAGATGATGAAGGCTATTTTACATATCATCCACAAGCTGGACTTATCTTCCATCAAGGGATCAGCTACAGGATTAGAGGGAGATGTTTTTCTGGAAGCTGCCCCATCGTCACCAGCACTGTCAGAACAAGTGGCTTTGTCTGATCCAGTTGCAGGACTGAAGCCCAAAGTGCCCAAAGACTTCCTCATTTTCATTAATCTTATTGAGTTTTGCAAGTGTGTCCTTCCAACGCATTGTATAGCAATGTTTGAGAATTGGGTGTATGTGTTTGGTAGAGAGATAATTGTCATGTCTACAAGGTTTCCAGTCGTCAGTGGGTTTTACAAATTACTGGAAGTTTGCATGAAAATCTGTAATAAGCTGTCTTTTTTTAAGCACATCAAGGCAGAGAAACCAGAAGATACCAGTGAAGATTTAGATATGGAAATAGTTGACACATCTGATCGCATGACATGCTTTGTGCTCTTTCGCAAATTTATTAAAGAGGTGCTGATTAGGATGCAGCAGTATAAAGATGACTTGCTAGCGTCTTGTCTGAGGCTGGTTCTTTCTCTTCCCCTTGAAATAGTGAAGCTTGATGTGGTTTCCTTTGTACCAGCTGTAAAGCTTACATTTAAACTTGGTTTGAGTTACACTCCTTTGGCTCAAGCTGGCCTGGATGCCTTACAGAGTTGGTCGGCTGCTCTTCCTTCTGAAAAGTTGAATCCTTACCTAATTGAAATCCTTCCTTGTCTGGATGGCTACCTCAAATCTTCTGCTGAATCAAGTGAAGAGGATCAGTTGTCTGAAGGGTCTAAGACCATTGTACTAAGCACGGCATCCCGCCATGGATCACAAGGGAGGAAAATTCCTCATAGATTGTTGAAAGTCAACAAACAGTCCCCACAACAGAGCACCCTTACTCCATTGGCCACTGTTCGCCATCAGATTCTTAGACTGCTGGGGAGTTTAGGAGGCCAGACAAACATCCTGCTTCTTGGGAGCAGAGAGATTGATCCCTCAAGGGCTGTGGCTTGGGACACTGAAAACCATCTAGGTTTTGCTGTTCCCTTTCAAGACATGAAGCCTGAAATTGATTTAGATCCATTTTTACCCCGTGTAGTCGAACTTGCAACAACATCAAGTGACCGACAAACAAAGGTTGCTGCTTGTGAGGCTCTTCACTCTCTTGTTCTCTACATGCTTGGCAAAAGTGTCACACAGCCTCAGGGAAAGAAAAGTCCAATGGAGAAATTGTGGAAGCATGTGTTTCCTTGCCTTCTTCAGCTGGCGTGTGATGTTGAACAGGTAGCGGAACAGTTATTCAAGCCATTAGTTTTCCAGTTGATCCACTGGTTCACCAACAACAGAAAGTATGAAAGTCCTGAAACAATGGCTCTGCTAGATGCAATTCTGGATGGCATTGTTCACCATGCTGACACTGCTTTGCGAGATTTCAGTGCCCAGTGCGTACGGGAATTCCTACAGTGGTCAATAAAACAGACAAGCGAAAAGCAATTAGAGAAGAGTCCAATCAATATCAAGTCTCTGTTAAAGCGTCTCTACAGCCTGGCTCTCCACCCAAGTACAGCAAAAAGGCTTGGTGCTGCTTTGGCCTTTAACAACATCTACACGATTTTCAGGCAAGACGTTTTAAGGCAACCTTGTACTGTAAAAATAGGTCTCAACGTAATCAAAGAAGACATAGTCAAACATGGGGAGGAGTCTTCTTTGGTTGATATTTTCGTGTTGGAAATTCTTGCAAACTACTTGGAAAGTTTGTCTCTTGCTCACAATGATGACCAGGCAAGAGAGATGTTTGTACTAGACAGGCATCTAACGGGATTTGGAACATTGAGTAGCATAACACTGATTCATGTGATTCCCTGGCTTATGAAACAGTGTGGGAAACCTAGCACTGAATGTCGACATCAGTGTATGAAACTTTTTTGCCAGTTGGCGCCACTTGTACCAGGTGTAAACTCTGCTGCTGATTGGATGAAGAAAACCTATGACGATCATCAGTCACTGTTTGTTCACAGCTTTGAAGGTGGAGGCGGAGGGCAAAAGGGTATTGAGCAGTATCCTACCCTATCAGATATTGGTGGACCATTTTCCTTGAAAGAGACATTTGTTTGGTTTGACTTCTTGTTGGCAGCTCTCGATTGCTACACTTGGAGTTTTGGTGAACGCCTGCTTTCACCAAGTCAAGTTTTTATCACTGCAAAAGGTGGTAAAAAATCCAGTGTTCTGTTCAAATCTTTGAGCTTTTTTGTGACCAAAATGGCCATGTTTGGCATCACCGCTGCCAGGGATTGCTTTACCGTAGGAGTGTCCAGTGACAAAGTGGAGATATTTACACCAAACGAGATCGACAGCTATAACAGGGCAAAATGCACAGTGATAGTTAGGATCATGAACTTTGTAACAGTGCTACTTCAAGTCTCCACTCAAGAAACTTTGAAGACTGTTCCTGCTGATTTTTGGAGTGATGGCCTATTCAATGTGGTACTTAGTTGTGTGTTGGAACCAGGACTCGTTGGTTTCAACATGGGAGATGTTGAAGTCATTGAAAAGCTTCCAGAACAGACTGGTGCATTGTGTAAGATGCTGGCACAGAAACTTCCTGGACCACTTGGTGAGAGGTTTAAAGAGAGCATTACAAAGAAAATTTCACTAGGAAGCCACTGTAACCTGTTTGATCAGCTGCCACTGCCCTTGTGTGGCCCAGAAGAATCTCAGGTGGACCATCTGCGTTTGGGTCATCTAGTTCAAGGATATCAACAGCTTCACTCTGCTGGTTTGCTTTTGTCCGCTCAGGCTGAAAATACACTAGAACAATACGCAGCAAAGTTGTTGTCAGCAGTGTATGAAGGTGTTAAGTCACCTGCAAATGTCCGATCCGCCATGATAAATCTTACTCCAGCATCACATCAATTTGCATGTAAATTGCTGGATTTGGCTTACAATCTTGGCCTAAAGCATAGCAGTCTAATGGAGTACATCATTCAAGACTTGTCCACCGATTCAGGTTCTTCCTTTGGTCTCGCATTCTACAGAACTTTTCAGACAAGCATTAATGGTTTCTTCATTAGAGAACCTAATCTACATGTGTCAAAGATTCTTACTACAGCACCCTCACATCCATTTTTGATTTCAAGCATGTTGAATGGAATTCTTGACCAAGTTATCAGAGAAGGGATGCTACGAAAGAGGCATGGATCAAGTATTGTTACTGCAATTTTAAACTGCTGGTCCGCCTTTGATGTGTGGTGGTCTACAAACTCCTCTATGGACCTCAAGCACTCCATGCTAATGATTCTTAAAAAAATTCTTATTTTAAACCCAAAGTTGGTTACAGATTCAAACAATCCAGTTTTCCCAAGCTTGCTTGACATGTACTTGCGTTTTATGAATGACAAGTCGGCACCTCTAGTATTTAAGAGTCAGGTGCTGGAGCTTTTGCCGCACTTTACCAAATTACCACAAGCACATATGGAAGCACTGAGACTAGGATTGAATAACTTTGTCGGCGATAATTTTCCACTGAAGTCTACAGAGTTCATTAAGGGTAGTCCGCAGTATAATGACTACATCCAGGCGTTAGACAAGCTCCTTGCTGCTCTTGTCACCTCTAGTAGTCTGGTGCTACTTGAACTGCTGATAACAATCATCTGCCGTGAAAGTAAACATATACACGAAGACCAAATTCAGAAGTCATTAGTAGCCTTCGTTCAAAGACCTGGTCTAACACCTGATCAAGCCAAGGCAGCCATGGATGTGTGCTTTGCAATTTTCATGAATGAACGAGACTATCGTCCAGACAATCGTCGAGCTGTGATTAAGCGGGTCTGCATAACATTCCTCCTGAACACAACCACTGCAGTGGTGAGGCAGTTTTACCTTCATCACATAAAGGACATCATAGGAATAATAGAAGCAAAGCAAACAAAGCCATCAGATCTGAATTTCGAATCCCAAGTGACTTCGAAGATTTGCTGTTTTGAACTGGTTGAGATATTGTATTCTCGCCTCTCCAAGTCTGAGCTGAACACACCGGAATCCACCATCAACAGAGCTTATGTGGGAGGAGAGGTCAAAACAGGGAAGGAGATGACTATGGCAATTACAAAGGCAGCGCGTGCAGTTGTAGTTGAAGACATGCGTGGTGAGACCGTTGCTCTTGAACTTCGGAGACAGTACCATTGTTACGCTTACAATTGCCTGGTTGCTCTGATTTCCTGTACCCAAACAGAGCTCAAGTTTTATGTTGCATTTCTTTTCTCTGAGAATCCAGTCAAGGGGCAGTTGCTGTTAGATAACTTGGTAGATTGCACCAGGACTTATGAATTTGAAGTGGAGCTCTCCGCCCCTATTGAGAGAAGAAAACAAATGACTGCCATTAGGAAGGAGGCCCGTTCTCATGGTTTGGAGGAAAGCAATCAAAGCGGTTCTCCTGGGATAACTGGCCAATCAGTTCATTACATGTGTTCCCAGTACCTTGCAGACAGTAGCCTCAGTGAAGACGTTAGCCAGTATGATTTTTCTACTCCTATCCAGGCTTATTCAGTAACTGACGTAACAGTCGCTCCATACAGGCCTAATGGGGGCAGCACAAGCGTGGAAAGCAAGGAAGAGTCATATGAAGTGAGTGAAGATACTGTGGAGATGGATGAACTAAACAGTCACGAGTGCATGTCAAAGATTACCGCCCTGGTGAAGCACTTGTTACAAAACAAGATCTCACCAGAACCTCCAAAGGGTGTGCCGTCTGATGAGATGCCAGCTTGGATGTCACCTTTGCACAAAAAGCTGACTTCTTCAAGTACCCACATAAACATTTGCCTTTTTATTGCAAAGCTGATTATAAACGAATCCAAGATATTTGAACCATATGCAAAATTTTGGCTCACTCCTCTGATGGAGCTGATCCTGCGAATGATAGACTCTGAACAGCCAGGCACTGAAGGCATAAATTACTTTACTCTTGATCTTGTGGTCACTATGCTGTCATGGAGTAGCACAGCAATACCAGAGGATCGGTATCTAACAAGCAGGTTTCTTGAGTTTATGATGTCAAGAACTCAACACAGGAATCGCTCTGTGTTCATAAACAATTTAGAGATTATAAAAAGCATGGTAGAAATCTGGAAGGACAGGCTTCACGTGCCTACAAAGGTGCTATTCGATGCGTTTTCCAACCCTGACCCCACGAAGAAGGACAATACTGCTGGTATTCAGTTGCTTGGTATCATTGCTGCTAATGGTCTTTCGCCCATTTCAATTGATTCTACCATTGATGAAGACAGATTTTACAGCTGTCTTGTGAATAATGTAACGTTCAAGTACAAAGAGGTTCATGCTGCTACAGCCGAAGTTATTGGTTTACTGATGAAGCAAGCAGCTGATGTTCAGAAGGTGTTTGATGGTCCTCTACATGACATGGTTACTCAGAAGCTGTCAACGTTAATTAATTCAGCCAAACCAGAACCTGGCAAGTTCATCACGTGTGTACACAAACTACAACTCAACTATCCGCCTATTGTCGACAGATTTGTGAATCAGATCTTGTTTAAGCTGCCCTCTGTACATGGTGATTTCAAAAAATACTGCCTTGAGATTGTTTGTTCCAGAGCAGAGCATATCCCAAACATGTTCACAGAGCTGAAAACAAAAGGATTAAAAGAAATTTTGTCTCATAGAGATGAAGGAAGCCAGGTTGCAATGCTTCGGATAATTCAGCGTTTGCTGAAGAAGCTGACTGTTCCAGAACTCCAGTTTTTGTTTCCATCAGTAACTGCCTTTGTAACTCATCCAAGCACAATGTGCAGAGAGCTTATGTATGATATACTCATCTGGATTTACGACACTTTCAGAGCCGATGAGTTATTCCAGGCCGAGGAAGGTGCTGCAGATATCCTAGCTGTCGCAAAAGATTGCCTCCTACAAGGCCTTGCAGATGACAACAGAGATCTTAAGTTGAAGTTAAGAAATTTCTGGAGTGATGAGAATCGACTCCCAGGAACCACGCTGGAACGTTTGGTTGAAGTATTACGAGCCATGTATTCACCCAACACTGAGAATCAGTACCTGGGCAACACTACAAACCTTATTCTGCACCTGACCTCCCTCAGCCCTGATTATGGCCGCATGATGTTTGAACAACCATTGTCTGAGTGCAAGTTTGAGGAATACCAAATAAATTACTCATGGCAACAGAGGCATATGTTGATGACACCCCTGTTTGCAGCAACGCAAAGCTCGTTTAGCTCTGGGATGACGCAAACACAGGGCTCAATGTCAGTGGATGGTGGTCCTGAGCTGAGGGCTACACAGAATCTACAGTTCACTCCAACTCAGGATCAGGGGAGATCGCAGACCTTCGACTGGCTTAATCCCAGTCAGGAATCAACTCCTGTTCAGTCTTTTGTTACCACCTCCACCCAAGCACAGTCATCATTACTGTTCAGCACCTCACAGAGAAGAGTCAACAGCAGGGCGTTCAAACCTGTTCCTCCTGACTTTGGAAGGCAAAAAATGATGCCCTCACAAGACCCAAGCCAGCAGTCTCAAGGTCCGCTTTCTATACCACTGCGCTGTCTATTCAATTGGGCATCAGGTTATACCCTGAATATGTTGTTCTTCACGTCATTTGATAGTTGCTTTGTGCTGCTTACTGTTAAAGGAGCAAGTGGGAAGGATGAAATTTCAAGATTGAAAAGGCGTTTCCTGAAAGACACGACTGACAGAAGCGAATTCTTTGCGAAACAAATGGCAAAGAGGAATATACTAAGAAAGCAAGCCACTGAGAGGCAGAAGGCTTCCCGTGAGAGCCGTGTTGTCATGTACAGGAAATATCGCACTGGTGACTTGCCAGATATTCAGATCAAGTTTTCTGAACTCATTGCACCCCTACAAGCGGTAGCACAGTGTGACAGCACTTTTGCTAAGCAGTTGTTCAGTGTACTATTTCGAGGAATATTTTCTCAAATTGAAGAGAAGTTGCCAGAAAGGGAGGCAGTCAGTGTGACATCAAACATCAAGTCAGCTGTGAATAACGTGATGTCCTCCTCAACACAATTCTTCCCTGCATTCATCTCCAGTGTTCAGGACATTTGTTACCACGAGTACAAACTTTCTATCGACCCAACCTCTGTTAGTACAGCATGTTTGACAAGCCTACAGCAGCCCATTGGGATCATGCTGCTTGAGAAACAGTTACTGCAGATTGACGATGATGGCCAGAGTAGCCACAAGAGAGCGCGATCCGCTGTTGCCCCACCGTCAGAAGTAACCACAACATGGATAGAATTGTCAAAATTGTACAGGTCCTTGGGTGACTATGACGTGTTACGGGGAATCTTTACTGGACACATCGGTACCAAACCCATTACCCAGGATGCCTTGGAAGCAGAAGCACGCGGAGACTTTTCACAAGCTCTCAAACTGTATAATGAGGCTTTTGCTACTGAGACCTGGCAAGATGGTGAACCTCAGCAAGAAGAAGAAGATTTGTGGGAAGATGGCAGGTTACAGTGTTTTGCGAACCTGACTCAGTGGGAAAACTTAGAAAAGTTCTCTGTTCTAAACATAGACGATGATGATTCTCCAGATCTTGATAAAGTATGGACAGACACATTTTTCCAGGAGCACTACCTTCCTTACCTGATAACAAGCAAACTGAAGCTACAGTGTCAGGGAGGACAGGACAATTCACTGAATTTGTTTGTCACTAGAGCAATGCAAAATAACGACAGAGCAGCACTGTTACAGGATCGTCACAGTGACAGCCTTGCTCTAATGTATCTGCTTCAAGATGACTATGACCGAGCATCGTACTATGCTGGGAGATATGAACAGAGTTTCCTCATGGACTGGGCAGGTTTGGACTCCATGATGTCTGCCAGCCGGTCTGCCAAACTACAGTCATTACAGAAGATGACGGAAATGCAAGAGTTTCTTGAATTTATTACCAGTGAAGAGAACTTCTCAAGTGTGAGGCCAGCGGTAACATTGTTAAACAAGTGGTCTTCAAGACTTCCTGATGCAAGGCTTCATCCAATCAGTGTATGGGATGACTTTGCTACAAACAGGACTGTATACATGAACAAGATCTTGAGGAAATTTGAGGCAGTTGATGCAGAGCAGAGGTCTGGAGTAAGTCTGCGTGATTTAAGAGACAGGTTCTTGCAACAGGAGGTTGAACTTCACCTGCACATGGCAAATACTGCAAAAGAACAGGCAAATTACACTGTGGCAAACAAATGTCTTCGCGAGGCACTTAATCTGATACCTCAGGATGATGACAGCTTGCAAATCAGTTGGTCGCACGTCTATGCCAAAGTACATCACAGAAAGACTCAAACATTAACAGCCGTAGAGGCTGTGGAGACCGCTCTGATGGTAGCAGGACAGTTAGATAAATTTAGCAGCAGTGTGGTATTGGACAGTGAGCCACTGAGGGGCCTGCAGCATCACATTCTCAGGAGCGAGACATTTGATGTCATCACAAAAGCAATCTCCACAGATGAAGGTTTAGTTCTTTCTGCCTTGGATGACAATAAGAAGGGGACTCTTGCAAGACTCTGTGGAATGGCTTCCGCTGATTCCCACAAGAAGGTTGTGAGTCAGCTGATGACACGCTCATTTGTATCACTGCAGTCTGCCATCAAGGCAGCTAAAAATGCTGAGGAGAAATGCAAAGGGCCCGACTCAAGCGATGGTATTGTGCAAGCTATGATGGCAATGGTTAACTTTTGTGATAACTGTCTCAGGAAGAAAGAAGAAGATGCTGGTCCACCCGTAGAGGTTGACACAAAGCTGTTTCCCGGTATAGTTGTGCGTTACATGTTGAAAGCCATGTGCTATAATTCAGATGAGGCTCGGCAGAGGTTTCCTAGACTTCTTCAGATTGTTGAAATGTACCCTGACACCCTTGAAGCCTTCATTAAAAAGGCTGCCGATGTTCCATGTTGGATGTTTATTGGTTGGATCAATCAGATGCTTGCAGTGCTGGACAAGCCTGAAGGCAAAGCAGTGCATACTATTCTACAGGAAATAGCGCAAACGTACCCTCAGGCCCTTTGGTATCCATTCAAGATAAGCAGTGAACAGTTTGTGTTTGAACACAGCAAAGAAGGAAAAGCGAATCAAGAGACTGTTGAGAGGCTTCAATCATCATTGGACAGTCCATTACTGAATGACTTTATTGCCGCGTTAGAGCAGCTTACAAACCCAGAGATGGTGTTTAAGGATTGGTGTGACGGCCCCATGAAACAGTTGTTAGAAGACAAAGACAAGAGGAATGATTCACAGGCCATTAAAGATTGCTTCCAAAGTATGTTTCAAAACCTGCTGGACAGTAAATCAAAGGCAGAGAGTGCATCTCAGACTCGAGGGAATGAGTTTGGCCCGTTTAGAAGAAGGTTTGCTCAGGATTTCGCAAGTGAAGTTCAGAAGTTGTTTGGCAAGGATGGTGAAAAACTGAAAGGACTTAAGCTCAATATAATCAATGTCAATCAATGTCACTTGAATGGGCTGACTATGGCTGCGGTGAGACAGAATTACTGGATACCACGTCTGAGACGTTTGGCAAAGCGAACCATAAGAAGCTGCTTCGGATGTAAGAGGTTCCAGGCCACACCCACCCCCTGTCCGCCTCCTGGAAACTTGCCTAGAGAAAGGACCGAGGGTTCTGTGCCATTCAAGGTAGTCGGAGTGAATTTCGCTGGTCCTATCAAATACTTAACGAAGACGAAGCAGGAACGGAAGGCCTACGTCGTGCTGTACACGTGCAGTCTTACACGGGCTGTTTACCTGGAACTGCTGCCTGACTTAACTACAGACGAGTTTCTGCGAAGTTTGAAGCGATTCATAGCTAGACACGGTCGACCAGAGAAGATATTTTCCGACAACGGCAAAACGTTCATTGCAGCGGAAAAATGGCTCAGGGGAGTGAGAAAGGAGGAGAAACTTAACGACTGGCTGGCCAAGCACCATGTAGAATGGCAATTCAACCTCAGCCGAGCCCCATGGTGGGGCGGACAGTTCGAAAGAATGATCGGGTTGATGAAACAAGCTTTGTACAAGTCCATTGGAAAAGGAAACCTCCGGTGGGAGGAGCTGGAGAGCGTCATCCTGGACATCGAGACAACGTTAAACGCCAGGCCACTCAGCTACGTGGAAGATGACGTTCAAATGCCGCTGCTGACACCTGCCACAATGCTGTTCGGACAGCCAAACTTGGTGCCTGAGGAAGACTCGGAGCAAATCGAGCAGAGTGATCTAAGAAAACGAGCCAGGTACCTACAGAGATGCAAGGATGTCTTATGGTCTAGGTGGTCATCTGAATATCTAAAAGCATTACGAGAGCGACACAACCTGAACCACAAGACAAGAGAAATGAAGCTGACAGTTGGAGAAGTTGTGCTGATAAAGGGTGAAGAGCGGAACCGGGGCAGATGGAAGATCGGCGTAATCGACAAGCTGATACCAGGCAGAGACGGAGTCGTGAGAGCCGTGCGTTTGAGGGCGGGGAAGTCTTTTTTAGAAAGACCAGTGCAGCATTTGTACCCCCTCGAGCTATCATGTGACAGAGCAGTGAAAGACGGGAGTGACCCCCTAAACGCTCATGCACGGGAGTTCAGACCACGAGCAGCAGCCGGGGCTGCGCGTCAGAGGATCGCAGAGATCGCGCGCGACGAACGCGCAGAGGAACACTGA

Transcript

ANN19025-RA

Protein

ANN19025-RA

MASSWCSESFVSATMNFQLEGSRYAKDIYNYARKAVDPQVSLTRYEVPRAGLCLFAKHAAQFKEYVAKDYEDLYEVFYRWCKHHNRETSYAGYLAMDAFLKQIAEHFVSRSADKSEMVMFKYFIKKFRSIIDSASSDTKQTSVAIRGYGYFSKPCKLFMQAEDVKFMFSEMMQRSEQIYLRQDELVEDKVQHLPSFLEALSCIVQELDEISDSVLASLEKLVVVLFNNFTRLAKGSKFLCCKALIKVLFNLSDKGSVLRRFLSEVVYQGLIRTCSLPVALDEVNEMTVTGDGEAMDTSSPKTSFKDYLELWEFLLEKGKFKDVSLVGQKLEQRESMHGMVYDEMMKAILHIIHKLDLSSIKGSATGLEGDVFLEAAPSSPALSEQVALSDPVAGLKPKVPKDFLIFINLIEFCKCVLPTHCIAMFENWVYVFGREIIVMSTRFPVVSGFYKLLEVCMKICNKLSFFKHIKAEKPEDTSEDLDMEIVDTSDRMTCFVLFRKFIKEVLIRMQQYKDDLLASCLRLVLSLPLEIVKLDVVSFVPAVKLTFKLGLSYTPLAQAGLDALQSWSAALPSEKLNPYLIEILPCLDGYLKSSAESSEEDQLSEGSKTIVLSTASRHGSQGRKIPHRLLKVNKQSPQQSTLTPLATVRHQILRLLGSLGGQTNILLLGSREIDPSRAVAWDTENHLGFAVPFQDMKPEIDLDPFLPRVVELATTSSDRQTKVAACEALHSLVLYMLGKSVTQPQGKKSPMEKLWKHVFPCLLQLACDVEQVAEQLFKPLVFQLIHWFTNNRKYESPETMALLDAILDGIVHHADTALRDFSAQCVREFLQWSIKQTSEKQLEKSPINIKSLLKRLYSLALHPSTAKRLGAALAFNNIYTIFRQDVLRQPCTVKIGLNVIKEDIVKHGEESSLVDIFVLEILANYLESLSLAHNDDQAREMFVLDRHLTGFGTLSSITLIHVIPWLMKQCGKPSTECRHQCMKLFCQLAPLVPGVNSAADWMKKTYDDHQSLFVHSFEGGGGGQKGIEQYPTLSDIGGPFSLKETFVWFDFLLAALDCYTWSFGERLLSPSQVFITAKGGKKSSVLFKSLSFFVTKMAMFGITAARDCFTVGVSSDKVEIFTPNEIDSYNRAKCTVIVRIMNFVTVLLQVSTQETLKTVPADFWSDGLFNVVLSCVLEPGLVGFNMGDVEVIEKLPEQTGALCKMLAQKLPGPLGERFKESITKKISLGSHCNLFDQLPLPLCGPEESQVDHLRLGHLVQGYQQLHSAGLLLSAQAENTLEQYAAKLLSAVYEGVKSPANVRSAMINLTPASHQFACKLLDLAYNLGLKHSSLMEYIIQDLSTDSGSSFGLAFYRTFQTSINGFFIREPNLHVSKILTTAPSHPFLISSMLNGILDQVIREGMLRKRHGSSIVTAILNCWSAFDVWWSTNSSMDLKHSMLMILKKILILNPKLVTDSNNPVFPSLLDMYLRFMNDKSAPLVFKSQVLELLPHFTKLPQAHMEALRLGLNNFVGDNFPLKSTEFIKGSPQYNDYIQALDKLLAALVTSSSLVLLELLITIICRESKHIHEDQIQKSLVAFVQRPGLTPDQAKAAMDVCFAIFMNERDYRPDNRRAVIKRVCITFLLNTTTAVVRQFYLHHIKDIIGIIEAKQTKPSDLNFESQVTSKICCFELVEILYSRLSKSELNTPESTINRAYVGGEVKTGKEMTMAITKAARAVVVEDMRGETVALELRRQYHCYAYNCLVALISCTQTELKFYVAFLFSENPVKGQLLLDNLVDCTRTYEFEVELSAPIERRKQMTAIRKEARSHGLEESNQSGSPGITGQSVHYMCSQYLADSSLSEDVSQYDFSTPIQAYSVTDVTVAPYRPNGGSTSVESKEESYEVSEDTVEMDELNSHECMSKITALVKHLLQNKISPEPPKGVPSDEMPAWMSPLHKKLTSSSTHINICLFIAKLIINESKIFEPYAKFWLTPLMELILRMIDSEQPGTEGINYFTLDLVVTMLSWSSTAIPEDRYLTSRFLEFMMSRTQHRNRSVFINNLEIIKSMVEIWKDRLHVPTKVLFDAFSNPDPTKKDNTAGIQLLGIIAANGLSPISIDSTIDEDRFYSCLVNNVTFKYKEVHAATAEVIGLLMKQAADVQKVFDGPLHDMVTQKLSTLINSAKPEPGKFITCVHKLQLNYPPIVDRFVNQILFKLPSVHGDFKKYCLEIVCSRAEHIPNMFTELKTKGLKEILSHRDEGSQVAMLRIIQRLLKKLTVPELQFLFPSVTAFVTHPSTMCRELMYDILIWIYDTFRADELFQAEEGAADILAVAKDCLLQGLADDNRDLKLKLRNFWSDENRLPGTTLERLVEVLRAMYSPNTENQYLGNTTNLILHLTSLSPDYGRMMFEQPLSECKFEEYQINYSWQQRHMLMTPLFAATQSSFSSGMTQTQGSMSVDGGPELRATQNLQFTPTQDQGRSQTFDWLNPSQESTPVQSFVTTSTQAQSSLLFSTSQRRVNSRAFKPVPPDFGRQKMMPSQDPSQQSQGPLSIPLRCLFNWASGYTLNMLFFTSFDSCFVLLTVKGASGKDEISRLKRRFLKDTTDRSEFFAKQMAKRNILRKQATERQKASRESRVVMYRKYRTGDLPDIQIKFSELIAPLQAVAQCDSTFAKQLFSVLFRGIFSQIEEKLPEREAVSVTSNIKSAVNNVMSSSTQFFPAFISSVQDICYHEYKLSIDPTSVSTACLTSLQQPIGIMLLEKQLLQIDDDGQSSHKRARSAVAPPSEVTTTWIELSKLYRSLGDYDVLRGIFTGHIGTKPITQDALEAEARGDFSQALKLYNEAFATETWQDGEPQQEEEDLWEDGRLQCFANLTQWENLEKFSVLNIDDDDSPDLDKVWTDTFFQEHYLPYLITSKLKLQCQGGQDNSLNLFVTRAMQNNDRAALLQDRHSDSLALMYLLQDDYDRASYYAGRYEQSFLMDWAGLDSMMSASRSAKLQSLQKMTEMQEFLEFITSEENFSSVRPAVTLLNKWSSRLPDARLHPISVWDDFATNRTVYMNKILRKFEAVDAEQRSGVSLRDLRDRFLQQEVELHLHMANTAKEQANYTVANKCLREALNLIPQDDDSLQISWSHVYAKVHHRKTQTLTAVEAVETALMVAGQLDKFSSSVVLDSEPLRGLQHHILRSETFDVITKAISTDEGLVLSALDDNKKGTLARLCGMASADSHKKVVSQLMTRSFVSLQSAIKAAKNAEEKCKGPDSSDGIVQAMMAMVNFCDNCLRKKEEDAGPPVEVDTKLFPGIVVRYMLKAMCYNSDEARQRFPRLLQIVEMYPDTLEAFIKKAADVPCWMFIGWINQMLAVLDKPEGKAVHTILQEIAQTYPQALWYPFKISSEQFVFEHSKEGKANQETVERLQSSLDSPLLNDFIAALEQLTNPEMVFKDWCDGPMKQLLEDKDKRNDSQAIKDCFQSMFQNLLDSKSKAESASQTRGNEFGPFRRRFAQDFASEVQKLFGKDGEKLKGLKLNIINVNQCHLNGLTMAAVRQNYWIPRLRRLAKRTIRSCFGCKRFQATPTPCPPPGNLPRERTEGSVPFKVVGVNFAGPIKYLTKTKQERKAYVVLYTCSLTRAVYLELLPDLTTDEFLRSLKRFIARHGRPEKIFSDNGKTFIAAEKWLRGVRKEEKLNDWLAKHHVEWQFNLSRAPWWGGQFERMIGLMKQALYKSIGKGNLRWEELESVILDIETTLNARPLSYVEDDVQMPLLTPATMLFGQPNLVPEEDSEQIEQSDLRKRARYLQRCKDVLWSRWSSEYLKALRERHNLNHKTREMKLTVGEVVLIKGEERNRGRWKIGVIDKLIPGRDGVVRAVRLRAGKSFLERPVQHLYPLELSCDRAVKDGSDPLNAHAREFRPRAAAGAARQRIAEIARDERAEEH

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8QGX4	DNA-dependent protein kinase catalytic subunit OS=Gallus gallus OX=9031 GN=PRKDC PE=2 SV=1
P78527	DNA-dependent protein kinase catalytic subunit OS=Homo sapiens OX=9606 GN=PRKDC PE=1 SV=3
Q8WN22	DNA-dependent protein kinase catalytic subunit OS=Canis lupus familiaris OX=9615 GN=PRKDC PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001506 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08163 all species →	DNAPKcs_CC3	DNA-dependent protein kinase catalytic subunit, CC3	Repeat	Interproscan
PF20502 all species →	DNAPKcs_CC1-2	DNA-dependent protein kinase catalytic subunit, CC1/2	Repeat	Interproscan
PF18701 all species →	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF20500 all species →	DNA-PKcs_N	DNA-PKcs, N-terminal	Repeat	Interproscan
PF02259 all species →	FAT	FAT domain	Repeat	Interproscan
PF19704 all species →	DNAPKcs_CC5	DNA-PKcs, CC5	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012582 all species →	Domain	DNA-dependent protein kinase catalytic subunit, CC3	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR046803 all species →	Domain	DNA-dependent protein kinase catalytic subunit, CC1/2	Interproscan
IPR040676 all species →	Domain	Domain of unknown function DUF5641	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR046804 all species →	Domain	DNA-PKcs, N-terminal	Interproscan
IPR003151 all species →	Domain	PIK-related kinase, FAT	Interproscan
IPR014009 all species →	Domain	PIK-related kinase	Interproscan
IPR050517 all species →	Family	DNA Damage Response and Repair Kinase	Interproscan
IPR045581 all species →	Domain	DNA-dependent protein kinase catalytic subunit, CC5	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11139 all species →	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006303 all species →	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0008630 all species →	Biological Process	intrinsic apoptotic signaling pathway in response to DNA damage	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06642	PRKDC; DNA-dependent protein kinase catalytic subunit	EC:2.7.11.1	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.