Detailed information of ANN19025-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:27110617...27185927
NR annotation: KAJ7390156.1, hypothetical protein OS493_026663 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8QGX4DNA-dependent protein kinase catalytic subunit OS=Gallus gallus OX=9031 GN=PRKDC PE=2 SV=1
P78527DNA-dependent protein kinase catalytic subunit OS=Homo sapiens OX=9606 GN=PRKDC PE=1 SV=3
Q8WN22DNA-dependent protein kinase catalytic subunit OS=Canis lupus familiaris OX=9615 GN=PRKDC PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08163DNAPKcs_CC3DNA-dependent protein kinase catalytic subunit, CC3RepeatInterproscan
PF20502DNAPKcs_CC1-2DNA-dependent protein kinase catalytic subunit, CC1/2RepeatInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF20500DNA-PKcs_NDNA-PKcs, N-terminalRepeatInterproscan
PF02259FATFAT domainRepeatInterproscan
PF19704DNAPKcs_CC5DNA-PKcs, CC5RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012582DomainDNA-dependent protein kinase catalytic subunit, CC3Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR046803DomainDNA-dependent protein kinase catalytic subunit, CC1/2Interproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR046804DomainDNA-PKcs, N-terminalInterproscan
IPR003151DomainPIK-related kinase, FATInterproscan
IPR014009DomainPIK-related kinaseInterproscan
IPR050517FamilyDNA Damage Response and Repair KinaseInterproscan
IPR045581DomainDNA-dependent protein kinase catalytic subunit, CC5Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11139ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0008630Biological Processintrinsic apoptotic signaling pathway in response to DNA damageInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06642PRKDC; DNA-dependent protein kinase catalytic subunitEC:2.7.11.1
DNA repair and recombination proteinsko03400deepkoala

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