Gene detail

Detailed information of ANN19070-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:29288554...29297629
NR annotation: CAH3183455.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P31399	ATP synthase peripheral stalk subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3
Q9DCX2	ATP synthase peripheral stalk subunit d, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pd PE=1 SV=3
P13620	ATP synthase peripheral stalk subunit d, mitochondrial OS=Bos taurus OX=9913 GN=ATP5PD PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007381 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05873 all species →	Mt_ATP-synt_D	ATP synthase D chain, mitochondrial (ATP5H)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008689 all species →	Family	ATP synthase, F0 complex, subunit D, mitochondrial	Interproscan
IPR036228 all species →	Homologous_superfamily	ATP synthase, F0 complex, subunit D superfamily, mitochondrial	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12700 all species →	ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000276 all species →	Cellular Component	obsolete mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	Interproscan
GO:0015078 all species →	Molecular Function	proton transmembrane transporter activity	Interproscan
GO:0015986 all species →	Biological Process	proton motive force-driven ATP synthesis	Interproscan
GO:0000274 all species →	Cellular Component	obsolete mitochondrial proton-transporting ATP synthase, stator stalk	Interproscan
GO:0046933 all species →	Molecular Function	proton-transporting ATP synthase activity, rotational mechanism	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02138	ATPeF0D, ATP5H, ATP7; F-type H+-transporting ATPase subunit d	-	Diabetic cardiomyopathy	ko05415	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.