Gene detail

Detailed information of ANN19253-RA in Nanomia septata

Genomic Location: chr7:120429978...120437775
NR annotation: KXJ27964.1, Transposon Ty3-I Gag-Pol polyprotein [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q810M1	Cilia- and flagella-associated protein 299 OS=Mus musculus OX=10090 GN=Cfap299 PE=2 SV=1
Q2YDG2	Cilia- and flagella-associated protein 299 OS=Bos taurus OX=9913 GN=CFAP299 PE=2 SV=1
Q5PQ44	Cilia- and flagella-associated protein 299 OS=Xenopus laevis OX=8355 GN=cfap299 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan