Detailed information of ANN19319-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:32076651...32116323
NR annotation: CAH3013963.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00801PKDPKD domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF01822WSCWSC domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF00088TrefoilTrefoil (P-type) domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF12248Methyltransf_FAFarnesoic acid 0-methyl transferaseFamilyInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000601DomainPKD domainInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR044913Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000519DomainP-type trefoil domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR051223FamilyPolycystinInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR022041DomainFarnesoic acid O-methyl transferaseInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04988PKD1L2; polycystin 1L2-Ion channelsko04040deepkoala

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