Detailed information of ANN19450-RA in Nanomia septata

Genomic Location: chr7:130980127...130988233
NR annotation: MCG8112909.1, DDE-type integrase/transposase/recombinase [Candidatus Thiodiazotropha endolucinida]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q99231Transposon Ty1-DR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-DR3 PE=1 SV=2
O13527Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-A PE=3 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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