Detailed information of ANN19488-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:36345497...36349630
NR annotation: CAH3014310.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4G0X9Coiled-coil domain-containing protein 40 OS=Homo sapiens OX=9606 GN=CCDC40 PE=1 SV=2
Q8BI79Coiled-coil domain-containing protein 40 OS=Mus musculus OX=10090 GN=Ccdc40 PE=1 SV=1
Q56A40Coiled-coil domain-containing protein 40 OS=Danio rerio OX=7955 GN=ccdc40 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006471 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00292
all species →
PAX'Paired box' domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR037386
all species →
FamilyCoiled-coil domain-containing protein 40Interproscan
IPR001523
all species →
DomainPaired domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16275
all species →
COILED-COIL DOMAIN-CONTAINING PROTEIN 40Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0035082
all species →
Biological Processaxoneme assemblyInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN19488-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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