Detailed information of ANN19524-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:37179520...37183492
NR annotation: CAH3033948.1, unnamed protein product [Pocillopora meandrina]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R0K2E3 ubiquitin-protein ligase TRIM31 OS=Mus musculus OX=10090 GN=Trim31 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000384 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06918
all species →
DUF1280Protein of unknown function (DUF1280)FamilyInterproscan
PF00097
all species →
zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR009689
all species →
FamilyProtein of unknown function DUF1280Interproscan
IPR018957
all species →
DomainZinc finger, C3HC4 RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31424
all species →
PROTEIN CBG23806Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN19524-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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