Gene detail

Detailed information of ANN19533-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:37330587...37337389
NR annotation: XP_029189741.1, rho GDP-dissociation inhibitor 1-like [Acropora millepora]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P52565	Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3
Q4R4J0	Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 SV=1
Q99PT1	Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005155 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02115 all species →	Rho_GDI	RHO protein GDP dissociation inhibitor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000406 all species →	Family	Rho protein GDP-dissociation inhibitor	Interproscan
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR024792 all species →	Homologous_superfamily	Rho GDP-dissociation inhibitor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10980 all species →	RHO GDP-DISSOCIATION INHIBITOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005094 all species →	Molecular Function	Rho GDP-dissociation inhibitor activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007266 all species →	Biological Process	Rho protein signal transduction	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12462	ARHGDI, RHOGDI; Rho GDP-dissociation inhibitor	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.