Gene detail

Detailed information of ANN19599-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:38700103...38710698
NR annotation: CAH3013582.1, unnamed protein product, partial [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN19599-RA

ATGCCGTTGGTAATCGAAGGCAAAACTGAGCATTCACGTTTCCGTTCCTTTACTGATTTTGCGAAGAAACACCCACACTTTAAAGATATTGCGGATGAATTTTGCAAGAAGCCCGTCCAGACAGTTGAAAGGAGGGGGCTGCTTTACGTCACACAAGGAGAATATGCCACGGTGACAAAGGAGGATGAAAATGTCACTGTGATGGGAACCGAAGATGCTACAACCTGTCACATTGTTGTGCTGCGACACACTGGAACAGGCGTGACTAGTTTAGGACACTTTGATGGACAGGATACATCTAATGGGCTTAAAAACATGATTGCCTCTGTGATGTGCAGTTCCAAAGCAAATGGTGGAAAGATTATGTTGCACCTGTTTGGGGGATTCCTTGATGACAGAAATACTTCTGATGGACTTACAACCTCCATCTTGGAAGTTATACAGAACCAAGACGAGCCCATCCATTTGAGTTCAGCTTGTGTCACCGGTTTTAATGATACTCTGGACAATGGTTTACATAAACCATGCATATATGGAGTAGGTGTTGCAGTACAGGGTGGTGAGATTTTCCCAGCGGCATTTGCAGACAAGGGCCCTGATGAATACATAAGACATGCTAGGAACTTCTCAGGTTTTGGAAGAATGGTGGAAATTTACAACTCTACTTACAAAGAGCTGCAAATCCTGCCATATGAACACAAGAGCACTGGCATCATACCATACATTCCATTCTTCCTTCATGCTCCTGATAAAGTCATACTTGAGAATCTTTCGACGTCTCCACACTGTGAACCACCAGACTTTGTGGCAAACATTAAAGCAACTTTGCGTCACATTCTTACTCATCAACGGCCACTGGTAACAGTGTTTCCAGGAGGAAGGCCTCGAGTTTACAAACGGCAACCAGGAAATGATTGTTGGGTCAGTCCGCCAAACAACAACTGCCCCACCCTTTTTGGTACATTTCCAACATTTTTAAACACCGCCTTTTCTTCTGTGGAGAGGAATCACAGCATGCAAACTGGGGCCATTCCTAAGCTTTACTCCGCGTGGTTTTGTCCTTTTGCACAAAGAGCATGGATCGCTTTGCTGGCAAAAGGCACAGAATTTGAGTACGTAGAACAAGACCCGTACAATAAGACCCCAGAGTGGCTAGCCATCAATCCTCGCGGAATGGTACCTGTCATCGTCGATAGGAACAATTCAGTTTATGAAAGTTCAGTGTGTATTGAATATGTGGACGAAGCATGGCCCAACGAACCGAGATTGCTGCCTACAGATCCTTACGACAGAGCTTATGCAAGAATCTGGGGAGATTTCATTGGGAAGAAAATTGTTCCATCGTTCTATGCTCTTCTTATCAAACAAAACAAGGAAGAGCAACAAGAAATCAAAGTTCAGCTAACAAGTCATCTCCTTGAGTTGACCAAAGCCATGCATCCTGTTGGAAAGTTCTTTCAAGGCGGAAAGCTTGGTTTTGTTGACATCATGATGGCCCCTTACGCAGCAAGGTTTTACATCCTAAAGCACTACCGAGGCTTTGAGTTACCTCAAAGCAGTGAGTTTGAAAGATTCCATGAATGGTGGAAAGCAGTAAAAAGTGCACCTGCTGTGAAAGCCACATTGCAGGATGAAGATAGATTAGTGGATATCTACCGGAGGTACGCTGACGGAAGTGCTAAGTCACAAGTTGCGGAAGCCATAAGAAAAGGCACCCGTCGGCCGACTGTCGACCGTCACTATCGGCCGAGTATCGACAGACATATCGGTCGACATATTGACCGATACTCGGTCGATATATCGGCCGATACTCGGCCGATAGTGACGGACGACATTGCTCGGCCGAGCGTCGGTCGACATATCGACCAGCATGTCGACCGAGACCCAGCCGATATGTCGGCCGACACTCGGCCTACATGTGAAGGTCGTTACGTCGACCGATACTCGGTCGACATATCGATCGATAAGCCACCGACATTTGCCCGATACTCTACTGACACTCGGCCGATACTCTACCAACCAACAAGAACTACTCCAACTTCACGGACTCTCATTGATCACATTATTTCAAACGATCCCAAGAGAGTAACACATACTGGTGTTCTACCGTGCTCCACCATAAGTGATCATGACGGTCCATATGCCTGCATTAATATTCGTACGGATAGATTTGTTCCACGTTTCAAGATCTTACGGAGTGAACGCCACTTTGAGGTAGAAAAATACATACAGGACTTTGAACAGCTCCCTCTCAGTATTATCTATGGTGTCGATGATCCTAACGACAAGCTGGACATGTTCAACACACTTGTCATTGAATGCATTGAAAATCACGCGCCATTAAAACGCATGAAGATCACCCGTCCACCTGCGCCATGGCTACATCATGATGATGTAAGAAGCCTCCAGACTGAAAGGAACATGCTACGTCACAAAGCCCATGAAATTAATACTCCACAGGTATGGGAAGCATTCCGCAAGGTGCGTTGCCTCCTAAAAGAAAAGATCAAAGCTGCAAAACAACACTTCATTAATAAAGCCTTATCATCTTCTAAACCTAAAGAGTTTACAAACACCGCTCAGCGCACTCTCGGATCTTCCAATGTCGATCCTAGAGATGATCTATTCAGTTTCATTAACAATTTGCATCAATCGGTATCGGAAGAGGAAGCCTTCAAGCTGCGGCTTGTTACACCAAGTGAAGTAGCTAGAGAGATAAATAGGATTCGGAATGATACATCTACCGGCCCTGATCAGATTCCAATCAAATTCATCAAACCAGTGACAGATATCATCGCTGGCCCGCTTACCCATATTATCAATGCCTTTATAAAGACCTCATCTTTCCCAGAAGCATGGAAGATTGCCAGAATAACACCGATACCAAAAAATGAAAGTATTGCAAGTGAATCAGACATGAGGCCCATATCCATTCTGCCAGTACTATCGAAAGTATTCGAAAGACTTGTCCATCAACAGGTTTTGTCTTTTATTGATTCACATAACTTGCTTAAAGATAACATATCAGGCTTTAGGAAAGGCCACTCGACAACCACTGTACTTTTAAGGATAAAAGACGACATCATCAAAGCCATGAAAAGGGGAGAGATTACACTTATGGTCCTTGCCGACTTTTCAAAAGCATTTGACACCATCAAATATAAAACTGTCCTGAAGAAGCTCGATTATCTTGGGTTTTCAAAATCTTTTCTTAACTGGACCATCGAATACTTAACTGACAGGCGGCATTTTGTCCAAATAGACGATAAAACATCTGACCGCAGTAGAGTTAACTTTGGAGTGCCACAAGGATCGATTATGGGACCTCTAATATTCAACCTCTACGTCGCAGATCTTCATGCCCACGTTAACATGCAATGTCACCAATACGCGGATGATACAACATTGTATGTGCACTGCAAGCCATCAAACCTCGAAAGTTGTAAACGTGACTTAAACAAAAACTTATGTAATCTTGAGGAGTGGTCTAGAAATGCAAATTTAGTAATTAATCCATCAAAAACCAAAATGATGGTCTTGTCTACAAAACAATTGTCATCTGCCCGTGCCTTGGAAGACTTAAATATGAAGATCGCAGTAAATAACGAGAACATTGAACGTGTTCCTAGTACTAAACTCTTGGGAACGTACATTAATCAACATCTGAAATGGGAAGACAATGTTAAGTACATTTGTACCTCTTGCTACGCCACACTAGCAATGCTTCGGAAGGTCAAAAATCTGCTGCCTTTTCATATTAGGAAGAACCTTGCCCAAGCACTTGTTCTATCTAAATTATATTATAATGACATTCTTTATCACTCGCTACCGGAATATTTAACAGCACGTCTTCATAGAGTACAAAAGGCAGCTGCAAGCTTTGTCAATGGTAAATATGCAACAACGCTTGATATCCTGAACTTGAATTGGTTACCGGTGACTGAACAGCGCGAATGGCATATTCTTAAAAGTACACACAAGAGTCTATACAGCTCAGACTGGCCAAATTATTTGAGACTAGAGACTTACGAAAGTAACCGAAACTTACGCTCCAGCAAGGGTATACAGCTCCAAAGATCAATGATCGCCAATACGTTTCAAGATGAAGCTGCTAATTTATTCAATAACCTTCCCCTTTCTTTAAGAAACTGCATGGATCCAATTTTATTTTTTAAGGAGACGAAGAAATTGCTACAAGATAAAGCCAGGTCCAGACTGTGA

Transcript

ANN19599-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96AB6	Protein N-terminal asparagine amidohydrolase OS=Homo sapiens OX=9606 GN=NTAN1 PE=1 SV=3
Q28955	Protein N-terminal asparagine amidohydrolase OS=Sus scrofa OX=9823 GN=NTAN1 PE=1 SV=4
Q64311	Protein N-terminal asparagine amidohydrolase OS=Mus musculus OX=10090 GN=Ntan1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000187 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14736 all species →	N_Asn_amidohyd	Protein N-terminal asparagine amidohydrolase	Family	Interproscan
PF13409 all species →	GST_N_2	Glutathione S-transferase, N-terminal domain	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004045 all species →	Domain	Glutathione S-transferase, N-terminal	Interproscan
IPR026750 all species →	Family	Protein N-terminal asparagine amidohydrolase	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR045073 all species →	Family	Glutathione S-transferase Omega/Tau-like	Interproscan
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan
IPR005442 all species →	Family	Glutathione S-transferase, omega-class	Interproscan
IPR045074 all species →	Domain	Glutathione S-transferases Tau, C-terminal alpha helical domain, plant	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12498 all species →	N-TERMINAL ASPARAGINE AMIDOHYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008418 all species →	Molecular Function	protein-N-terminal asparagine amidohydrolase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0004364 all species →	Molecular Function	glutathione transferase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006749 all species →	Biological Process	glutathione metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN19599-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.