Detailed information of ANN19623-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:39012444...39032969
NR annotation: RMX46308.1, hypothetical protein pdam_00000560 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5TTP0WD repeat-containing protein on Y chromosome OS=Anopheles gambiae OX=7165 GN=WDY PE=4 SV=4
B4GQJ7WD repeat-containing protein on Y chromosome OS=Drosophila persimilis OX=7234 GN=WDY PE=4 SV=2
B7FF06WD repeat-containing protein on Y chromosome OS=Drosophila grimshawi OX=7222 GN=WDY PE=4 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR051242FamilyWD repeat and EF-hand domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44324WD40 REPEAT DOMAIN 95Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24747WDR49; WD repeat-containing protein 49-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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