Gene detail

Detailed information of ANN19687-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:40828824...40849824
NR annotation: KAJ7340362.1, Src kinase-associated phosphoprotein 2 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN19687-RA

ATGGAGCCAGTGAACAAAGACGTCAAAGAAGCTGTGTTAAATGCTAATAAGTTTCTTTCAGTCACATTGGCGCAGGAGAAACTATCACCTCCAGCCGAGAAAGAACGCCAATCACTTGCAGAAAAGTTCAAGAATTTAATAACACAACTTGGTTTGCAAAGTGAACAGCCTGGAGTTGGCAAGCCCCCACCACGTCCACCTAAAGGTGGGATACCTATTCCTGCACCTGTGCCTAATACGGATGAGGGAGGAGAGGAGCTTTACGATGACCTAGCCGCTGTAGCAGATGATGACCAGGATTATTCTCCGATGGCTCCAGGTGGCGAGGAAAACGCCGCAGATATTGGAGGCGAAAATTATGAGGTCATGGCAGCAGATTCAGAGACTCCACAGGATGAAGGAGAAGACTATGTGGCCATGGAAGATGACACCACTCCAGTTGAACAGGAAGATTATGAAGAGCCTGGTCAAGCTGAGGAAGGTACTAAACAGGATTCTACACCAGGCGATGAAGATTATGAGATGCCAGGGGCAGAAGATAGCATGGACTATGAAGTTGCAGTTGGATCAGTGGAAACTCCTGCAGACAGTTTGTATGAAGGTGTTGAGACTGCTAACGAAAGTTCAGTTGATGGTTTGACGAGTAAACAAAGATCAGGGACAATGATCTTTGAGAACCTGACAAAGGACACTAAACCCGACAGCATTGAAGGTGTAATTAAGAAAGGTTTTCTGAACAAGCATCGCAAAGACGGGAAGGTTTTCCTTGGGAGCAAATGGCAGAAACGATACTGTGTGGTGCGAAACCATGTGTTGTATTACTTCAAAGACAAGAAATCAGCTAGACAACAAGGATACGTCTTGCTGCCTGGATATCAAGCTGCAATCGCTAACAAGAAAGGCCGTGAGTTCACCCTGACTCATCCAGAAGGACACAGGTCTTATCAGTTTGAATCCACCTCAAAGAAAGAAACAGAGGAATGGATAGCAGCCATACAGAAGGCTGCTAACGCACCTATATCAGAGAGCAACAATGTTCATTTACATGAACTGCGTAATAAGCAGGCATCTGGTGATGAAGACAGCTTGCATTATGAAGACACAGGGCCAAGAAAGGACAGCACAATGGAAGAGGAAGAGGAACCAATAGAGGATGAAGGAGACGTATATGATGACACTAACGAAGATCTGTACGAAGAAGTTGGCAGTGTTCAATCTCCCACTCCCACCCAGCAGTCCAGTCCACAGTTACCAGAATATGAAATTACTGGTCCAACTAGTGTTGTTGCACCAAAGCCTGTGGAGCCAATAATGGAGGAGGATTATGAACTGCCAGAGCAGTCGTCACCAGCACCAGCTCTTCCCCCGCCCCGCCCTGTCAAATCAAAACCACAACCACCTCAAGATGACAGTCCGCCTATTGTCCCACCTCCACGGCCTTCTAAACCTCAGCCACCCCCTCCCACACCACCTGCTTCTGCTCCACCTGTACAGGACAAAGATGCTGATGACTTACCGCCACCCCCTCCCCCAGGAGAAATAGAATTAGAGGACTATGAACCGCTGGAAACCTTTCAGGAGGCCCAAGTTCCTGCCCCTGTTTTACCTCCCGTGCCAGCTGCAGTACCTGTTCGACCTCCCAAGCGCAAGGTATCGCCACCATCAAACGATGCTCTCCCACCAAAACCACAAGAAACAGTTCCCGTGCGACCACTGCGGCCGGGCCCTAAGCCTGTAACCCCAGCACGAGCAGACGAAACTCCAGCAAGTGCTGCGGAAGAGGAAACGAACTGCATCAACTATGCAAATGTCTACCAGGCGCTTTGGGATTGTGCTTCTAATGAGAAGGACGAGTTGGGATTCCGACGAGGGGACCTGATTTACATCTACGAAAAGCCGCATGCTGATTGGTGGATAGGATCCCTGTTTAAACCCCAGGGGTACTCTGTGGGGCTAGTACCTAAAGATTATGTTATGGAAGCGTATGAGCTCAGCGCATATTAG

Transcript

ANN19687-RA

Protein

Uniprot

Uniprot term	Description
Q32LP7	Src kinase-associated phosphoprotein 2 OS=Bos taurus OX=9913 GN=SKAP2 PE=2 SV=1
Q5FVW6	Src kinase-associated phosphoprotein 2 OS=Xenopus tropicalis OX=8364 GN=skap2 PE=2 SV=2
Q6DII7	Src kinase-associated phosphoprotein 1 OS=Xenopus tropicalis OX=8364 GN=skap1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169	PH	PH domain	Domain	Interproscan
PF14604	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR037781	Family	SKAP family	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15129	SRC-ASSOCIATED ADAPTOR PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23471	SKAP2; src kinase-associated phosphoprotein 2	-	Yersinia infection	ko05135	deepkoala