Detailed information of ANN19688-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:40851232...40859085
NR annotation: CAH3037207.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75127Pentatricopeptide repeat-containing protein 1, mitochondrial OS=Homo sapiens OX=9606 GN=PTCD1 PE=1 SV=2
Q8C2E4Pentatricopeptide repeat-containing protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ptcd1 PE=2 SV=2
A2VD13Pentatricopeptide repeat-containing protein 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ptcd1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009404 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13041
all species →
PPR_2PPR repeat family RepeatInterproscan
PF13812
all species →
PPR_3Pentatricopeptide repeat domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002885
all species →
RepeatPentatricopeptide repeatInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47932
all species →
ATPASE EXPRESSION PROTEIN 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN19688-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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