Detailed information of ANN19721-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:41614920...41626275
NR annotation: CAH3190321.1, unnamed protein product, partial [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B1VEI4D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) OX=504474 GN=mshA PE=3 SV=1
A1R8N8D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1
Q4JSW2D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium jeikeium (strain K411) OX=306537 GN=mshA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000025 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13637
all species →
Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023
all species →
AnkAnkyrin repeatRepeatInterproscan
PF20706
all species →
GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050889
all species →
FamilyDendritic Spine Regulation and ScaffoldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24166
all species →
ROLLING PEBBLES, ISOFORM BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN19721-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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