Gene detail

Detailed information of ANN19745-RA in Leptoseris scabra

Genomic Location: Scaffold_9__1_contigs__length_46255593:42174733...42182156
NR annotation: CAH3044642.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91YY4	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Mus musculus OX=10090 GN=Atpaf2 PE=1 SV=1
Q8N5M1	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens OX=9606 GN=ATPAF2 PE=1 SV=1
Q1LZ96	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Bos taurus OX=9913 GN=ATPAF2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007243 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07542 all species →	ATP12	ATP12 chaperone protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011419 all species →	Family	ATP12, ATP synthase F1-assembly protein	Interproscan
IPR023335 all species →	Homologous_superfamily	ATP12 orthogonal Bundle domain superfamily	Interproscan
IPR042272 all species →	Homologous_superfamily	ATP12, ATP synthase F1-assembly protein, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21013 all species →	ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043461 all species →	Biological Process	proton-transporting ATP synthase complex assembly	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0033615 all species →	Biological Process	mitochondrial proton-transporting ATP synthase complex assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07556	ATPeAF2, ATPAF2, ATP12; ATP synthase mitochondrial F1 complex assembly factor 2	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.