Detailed information of ANN19952-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:489536...504598
NR annotation: CAH3150013.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90Y57Protein jagged-1a OS=Danio rerio OX=7955 GN=jag1a PE=2 SV=1
P78504Protein jagged-1 OS=Homo sapiens OX=9606 GN=JAG1 PE=1 SV=3
Q63722Protein jagged-1 OS=Rattus norvegicus OX=10116 GN=Jag1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF01414DSLDelta serrate ligandDomainInterproscan
PF07657MNNLN terminus of Notch ligand C2-like domainDomainInterproscan
PF21700DL-JAG_EGF-likeDelta-like/Jagged, EGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR026219FamilyJagged/Serrate proteinInterproscan
IPR001774DomainDelta/Serrate/lag-2 (DSL) proteinInterproscan
IPR011651DomainNotch ligand, N-terminal domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR003645DomainFollistatin-like, N-terminalInterproscan
IPR001007DomainVWFC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP