Gene detail

Detailed information of ANN19991-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:1215332...1220382
NR annotation: CAH3186835.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P39428	TNF receptor-associated factor 1 OS=Mus musculus OX=10090 GN=Traf1 PE=1 SV=2
Q13077	TNF receptor-associated factor 1 OS=Homo sapiens OX=9606 GN=TRAF1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF21355	TRAF-mep_MATH	TRAF/meprin, MATH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002083	Domain	MATH/TRAF domain	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR052958	Family	Interferon-induced PKR regulator	Interproscan
IPR008974	Homologous_superfamily	TRAF-like	Interproscan
IPR049342	Domain	TRAF1-6/MEP1A/B-like, MATH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46289	52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01831	PTGIS, CYP8A; prostacyclin synthase	EC:5.3.99.4	Cytochrome P450	ko00199	deepkoala