Gene detail

Detailed information of ANN20105-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:2877062...2877943
NR annotation: CAH3122188.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K4H1	Kynurenine formamidase OS=Mus musculus OX=10090 GN=Afmid PE=1 SV=1
Q566U4	Kynurenine formamidase OS=Danio rerio OX=7955 GN=afmid PE=2 SV=2
B5XB27	Kynurenine formamidase OS=Salmo salar OX=8030 GN=afmid PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003259 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07859 all species →	Abhydrolase_3	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR050300 all species →	Family	'GDXG' lipolytic enzyme	Interproscan
IPR013094 all species →	Domain	Alpha/beta hydrolase fold-3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48081 all species →	AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016298 all species →	Molecular Function	lipase activity	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01432	AFMID; arylformamidase	EC:3.5.1.9	Tryptophan metabolism	ko00380	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.