Gene detail

Detailed information of ANN20107-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:2967143...2984190
NR annotation: XP_029191414.2, 4-hydroxyphenylpyruvate dioxygenase-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5BKL0	4-hydroxyphenylpyruvate dioxygenase OS=Xenopus tropicalis OX=8364 GN=hpd PE=2 SV=1
Q6TGZ5	4-hydroxyphenylpyruvate dioxygenase OS=Danio rerio OX=7955 GN=hpd PE=2 SV=1
Q5EA20	4-hydroxyphenylpyruvate dioxygenase OS=Bos taurus OX=9913 GN=HPD PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004616 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00903 all species →	Glyoxalase	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	Domain	Interproscan
PF13669 all species →	Glyoxalase_4	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041735 all species →	Domain	4-hydroxyphenylpyruvate dioxygenase, C-terminal	Interproscan
IPR029068 all species →	Homologous_superfamily	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	Interproscan
IPR004360 all species →	Domain	Glyoxalase/fosfomycin resistance/dioxygenase domain	Interproscan
IPR037523 all species →	Domain	Vicinal oxygen chelate (VOC) domain	Interproscan
IPR005956 all species →	Family	4-hydroxyphenylpyruvate dioxygenase	Interproscan
IPR041736 all species →	Domain	4-hydroxyphenylpyruvate dioxygenase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11959 all species →	4-HYDROXYPHENYLPYRUVATE DIOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0003868 all species →	Molecular Function	4-hydroxyphenylpyruvate dioxygenase activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006572 all species →	Biological Process	tyrosine catabolic process	Interproscan
GO:0009072 all species →	Biological Process	aromatic amino acid metabolic process	Interproscan
GO:0016701 all species →	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00457	HPD, hppD; 4-hydroxyphenylpyruvate dioxygenase	EC:1.13.11.27	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.