Detailed information of ANN20214-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:5151560...5154739
NR annotation: CAH3112048.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5T197E3 ubiquitin-protein ligase DCST1 OS=Homo sapiens OX=9606 GN=DCST1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009043 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07782
all species →
DC_STAMPDC-STAMP-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452
all species →
DomainSH3 domainInterproscan
IPR012858
all species →
DomainDendritic cell-specific transmembrane protein-likeInterproscan
IPR051856
all species →
FamilyCell Surface Receptor and E3 Ligase ProteinInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21041
all species →
DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN20214-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP