Detailed information of ANN20217-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:5220302...5228685
NR annotation: KAJ7365362.1, hypothetical protein OS493_005469 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000001 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13965
all species →		SID-1_RNA_chandsRNA-gated channel SID-1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025958
all species →		FamilySID1 transmembrane familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12185
all species →		SID1 TRANSMEMBRANE FAMILY MEMEBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003725
all species →		Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0005764
all species →		Cellular ComponentlysosomeInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0050658
all species →		Biological ProcessRNA transportInterproscan
GO:0051033
all species →		Molecular FunctionRNA transmembrane transporter activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN20217-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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