Detailed information of ANN20310-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:6924068...6934629
NR annotation: CAH3111813.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01728Sodium/calcium exchanger 1 OS=Rattus norvegicus OX=10116 GN=Slc8a1 PE=1 SV=3
P23685Sodium/calcium exchanger 1 OS=Canis lupus familiaris OX=9615 GN=SLC8A1 PE=1 SV=1
P48766Sodium/calcium exchanger 1 OS=Cavia porcellus OX=10141 GN=SLC8A1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF01699Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan
PF16494Na_Ca_ex_CC-terminal extension of sodium/calcium exchanger domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR004836FamilySodium/calcium exchanger proteinInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR004837DomainSodium/calcium exchanger membrane regionInterproscan
IPR044880Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR051171FamilyCalcium/Cation AntiporterInterproscan
IPR032452DomainSodium/calcium exchanger domain, C-terminal extensionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11878SODIUM/CALCIUM EXCHANGERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007154Biological Processcell communicationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005432Molecular Functioncalcium:sodium antiporter activityInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015491Molecular Functionobsolete cation:cation antiporter activityInterproscan
GO:0030001Biological Processmetal ion transportInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0098794Cellular ComponentpostsynapseInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05849SLC8A, NCX; solute carrier family 8 (sodium/calcium exchanger)-Glycosaminoglycan binding proteinsko00536deepkoala

TOP