Gene detail

Detailed information of ANN20437-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:9339342...9348932
NR annotation: XP_029189810.2, uncharacterized protein LOC114956769 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN20437-RA

ATGTGCGTTGTTTGGACTTTTTTTGGTAAAAGCCGAGATCAATACGCCAACAGCCTTAACTTAGTTGATATTACTGTTTGTCACTCTTTACTTCTTTTTTCTTTTTTCTTTAATAAGGGCGTCACGGACTTTGAAAACTTGATGGCAATATGGCGTCACTATAGTGGCCAGTTGCAAGATGGCAATAGCTCTTACTATGGTTATTACCCGGGCGGTGGAGCCTGCTCTTTGGACCCTTTGACAACAGACTTCAGTCACAGGGGCTGGGTAAAGGTTGCCGCAGGAGATGGCGAGTTCCAAAAGTCGCTCGGATGTGGAATGTGTGTAGAGATCAAAGGTGAAGGGATCCTGGCTGACCTTGCTAGCAGAGGAAAAATCCCTAAGACGCCAATTGTTGGCCCCATATACGCCATTGTAATTGATCGTTGTGGAAATTGCAAACAAGGGTTCGATTTATACACTCCTGGCTCTGACGTGTGGAAGACGCAATTCAGAGCCATCGATTGCCCCAGAGCTCCAGGAGTCAATGGCAACATTAAGTTTAGATTTTTGGATAGCAACCCATGGGCCATGAAACTACAAACAAGAAATTCCAGGCAAGTTTATAAACCAAGGGCAAAGACATGTCTGACCTCTGATATGTTTTATATAACTACGATAAGCGTACCCATACCCAGCCTACCAAGCATACCCAGCTTGCATAGCAGTCGTTTCCTTTCCAAGCGTAGCTTCTGGGGAGAAGCATCCTCGGAGACCCAGGGGCAAGTGGTGACAGTTGGACTTGAGATATTACACAATAGGAAGTGGGTTTGTTTACCACGAACAGAGGACAACTACTTCCTGATTGGGTCACCAAACAGAGTCAAATTCCCATTGCGAGTCCGCCTGACAAGTGTCAGCGGTGAACAGCTGGAATCTACCATTACAGAACTCAAGAATGACGTGGATATTACGTCATCTGTGCAATTTTCTGGCTTTGAAAAGGGAAGCGATCCACGTACCATCAAGTGCTATGGCCAAGACCAAACTCTTAGTAACGATGAAAGTGAAAAAACAGTGGACGAATCGTTTTGCAAAGGCAAATTCGATGGATCTTACAATGACCCCAGCGACTGCAGAGCTTATTACCAGTGCTTAGGAGGGAGCACAATTAGGAGACACTGTCCGGGAAGGCAGGTCTTCAATGCTGTTCTCAAAACATGTGATAACGCTGCAAATTTCCCGTGTCAACAAAAAGATGTTGTTAGTAGCCTCATCCCAAGGGTGGAGAAAGTAACAAGCAAGATTGTGAAATCCGAAAGTTTGAAAGATGATAAAACTGACTCTGACACCAAGGTGAATGACACTTTTTGCAACGGTAGATTTGATGGGTTTTACGATGATCCGAACGACTGCCAGGCGTTTTTCCAATGTTTGAAGGGAAAAGCTACAAAGAGATTCTGTCTTAAAGGAATGGTGTTTAATGCAATGTTAAAAACATGCGACACACCGCACAACTTCCCATGCCGTCTGACAGAAGACAATGGAGCTGCGTCCACATTACAAACCGAACCAGCGGCGAAACCCGATCATCGACAACAAAAGGGAAATGAAGGTAGGACGATGCAGAAAATTTTGAAGGGGAGGGGAAAACCTGTGACCAGAACAGGAGACAACTCTGAGACGCCTGTGGACAAGGTGAAGCCGGACGCTATCAAGTCTGAGAGCAAGACAAACGAGAACATAGTGGATAAAGATTTCTGCATTGACAGGCCAAATGGTAATTACGCTGACCCATATGACTGCTCCGGTTTTTACACCTGTGTCAACGAGGAAACACTAAAGGAAAACTGTCCCAAAGCCTTACGTTACAACTACACCACGGGTGAATGCGACTGGCCCGCCAACGTACAGTGCATAAAACAACAACTCTTTAAGGCGTGGATTCACAAAGCAAGAACAGGAGATGGATCTGATGACGCAGGGCTCACGATCCATGGATCGATCAGACGGGTGACAGCCATTGCCAGAAAACACGTCATCCACAAACCGGACGAAGAAATAATCATAATAAACGAAAACGACAACGACAACGGAAAAAAGTAA

Transcript

ANN20437-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002557	Domain	Chitin binding domain	Interproscan
IPR036908	Homologous_superfamily	RlpA-like domain superfamily	Interproscan
IPR036749	Homologous_superfamily	Expansin, cellulose-binding-like domain superfamily	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR051940	Family	Chitin-binding developmental regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23301	CHITIN BINDING PERITROPHIN-A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan