Detailed information of ANN20724-RA in Montipora grisea

Genomic Location: Scaffold_19__1_contigs__length_4594208:140921...143359
NR annotation: CAE7417860.1, thrS [Symbiodinium microadriaticum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0AAL5Threonine--tRNA ligase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=thrS PE=3 SV=1
Q2SDJ2Threonine--tRNA ligase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=thrS PE=3 SV=1
A1U2C3Threonine--tRNA ligase OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=thrS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF00707IF3_CTranslation initiation factor IF-3, C-terminal domainDomainInterproscan
PF02824TGSTGS domainDomainInterproscan
PF05198IF3_NTranslation initiation factor IF-3, N-terminal domainDomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004095DomainTGSInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR019815DomainTranslation initiation factor 3, C-terminalInterproscan
IPR001288FamilyTranslation initiation factor 3Interproscan
IPR033728DomainThreonine-tRNA ligase catalytic core domainInterproscan
IPR036787Homologous_superfamilyTranslation initiation factor 3 (IF-3), N-terminal domain superfamilyInterproscan
IPR019814DomainTranslation initiation factor 3, N-terminalInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR019813Conserved_siteTranslation initiation factor 3, conserved siteInterproscan
IPR002320FamilyThreonine-tRNA ligase, class IIaInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR036788Homologous_superfamilyTranslation initiation factor 3 (IF-3), C-terminal domain superfamilyInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR012676Homologous_superfamilyTGS-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11451THREONINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0004829Molecular Functionthreonine-tRNA ligase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006435Biological Processthreonyl-tRNA aminoacylationInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01868TARS, thrS; threonyl-tRNA synthetaseEC:6.1.1.3
Transfer RNA biogenesisko03016deepkoala

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