Gene detail

Detailed information of ANN20825-RA in Montipora grisea

Genomic Location: Scaffold_19__1_contigs__length_4594208:1564496...1568735
NR annotation: RKZ62542.1, endopeptidase La [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN20825-RA

ATGACTGATTTACACACACTTTATCAAACGAATTATACAGAATGGGCAAAGCAATCAGCAGATTTACTCAAAGCAGGGCGTTTTTCAGAACTAGATATTGAACATTTGTTAGAGGAATTAGAAAGTATGGGTGCGAGTGAACGCAATGAATTAGAAAATCGTTTAGTGATACTCATTGCACACTTGTTAAAATGGCAATATCAGCAATTATCTGAGCGTTGGCAAGAATTTGACGGTAGAAGTTGGCGTTCAACTATTATTGAACAACGTGCACGATTGGCTAAACGATTACGTAAATCCCCAGGGTTAAAATCGAGCCTGACTGAAATAATTGAGGAAGCATATGAAGATGCAGTTGAACTTGCTATAGATGAAACTGGACTGCCAAAAAGCACTTTTCCAAAGGACGTTGAAGAAGTTCAAGCTGCTGAAAAAGAAACTGATGACAAGGAAAAGTCCGAAGGTGGCTTAATTTCTTATAAAGAAGCCTTACCTAAAATGGTTCATGTTTTACCTTTGATGAGTCGCCCTTTTTTCCCACACCAAGTGATTCCAATGATTATTGAGAATGACTTGTGGTCAGAAACAATTAAAGAAATCAACGACAGCCCGCATAAATTACTAGGCCTCATGCTGTGTAAAAAAGATAATGTCGAAGATATTACCACGTTATCAACGGAAGACTTTCACCCTATAGGTACAGTTTGCAAAATTCATCGTATTATTGAAGGTGATAAAGACGAACACCTACAAATTATTGTAGAAGGCCTGCAACGTTTTGAAATCTCAGACTGGATTAACACCCAGCACCCATTTATGGCAAACGTAGATTATCATCTTGAAGTACAGAATGAGAAAGATGCTGAACTGAAACCACATGTCTTGGCAATTATCAATACAATTAAAGAATTGTTACCTCTGAATCCGCTTTATAATGAAGAATTAAAAATGTTCTTGGAGCGATTTAGCCCTGAAGAACCGTCTTCACTAGCAGATTTTGCCGCCAGCCTAACCACATCAAGCCGTGAAGAATTACAAGATATTTTAGAAACACTGGATTTATCTCCTCGATTAGAAAAAGTATTATTGCTTTTAAACAAAGAGTTGCAATTAGCTAAAGCGCAAGTTGAAATTCGTCGTCAGGTTGAAGATAAAATGGAAGATCACCAACGTGAATTCTTCTTACGTGAACAATTACGGGCGATTCAACAAGAATTAGGCATTGAAAAAGATGACCGTACCGCACAAGTGGAGAAGTTCCGTGAACGCTTGGAAAGCTTAACTGTTCCTGAAGCTGCACAAAAAGTCATTGATGATGAAATGGATAAAATGGCGGTGTTAGAAATTGGCTCGTCAGAATATGCGGTTACACGTAATTATCTAGACTGGCTTACTTTATTGCCTTGGGGTAAATTTTCAACCGATCATTTAGATATACCTAAAGCGCGAGAGATTTTAGATGCAGATCATGAAGGCTTAGAAGATGTTAAAGATCGTATTATGGAATTCTTAGCCGTCGGTAAATTAAAAGGCAGCATCAGCGGCACAATTCTATTATTAGTAGGCCCTCCCGGTGTGGGTAAAACCTCTGTAGGACGTTCGATTGCCAATGCGCTAGGTCGTTCCTTCTTCCGCTTTTCTGTGGGCGGCATTCATGATGAAGCAGAAATCAAAGGTCACCGCCGTACTTATATTGGTGCAATGCCCGGAAAATTTATCCAAGCCATGAAAGAAGTGGAATACGCAAACCCTGTAATTATGCTGGATGAAATCGATAAAATTGGTACGTCTTATCGTGGTGATCCTGCATCTGCTTTATTGGAAGTATTAGACCCTGAGCAAAACAGCGACTTTTTAGATCATTATTTAGATGTACGGTTTGATTTGTCTAAAGCTTTATTTATCTGTACGGCTAATCAATTGGATACGATTCCAGCCCCATTACTCGATCGGATGGAAGTAATTAAATTATCAGGCTATTTGACCAGTGAAAAGCTTCAAATTGCTAAAAAACATCTAGTGCGCCGCCAATTAGAAAAATCAGGCTTAAAAGACGATCAACTTATATTGCCTGATGAAACTTTGGTTAATATCATTGAAGATTATGCGCGTGAAGCGGGTGTGCGGAATTTAGAAAAACAAATTGGCTCGATTGCGCGTAAGGCAGCGTTGAAAATGTTGGAAGGGGCTGAAACACCTATTGAAGTTAATACAGATAATTTAAGTGATTATTTAGGTAAGCCTACATTTGAAAATGACAAAGAGCTTTCTGGGGTTGGTGTAATTACAGGCTTGGCATGGACTGCGATGGGTGGTGCAACTTTAAGTGTTGAGGCTACGCAAATCCATAACTATGCACGCGGCTTTAAACTGACGGGGCAACTGGGTGATGTGATGAAAGAATCAGCTGAAATTGCCTATAGTTACTTAACCAGTGAATGTGAACAATTTAGAGTGAAGAAAAAGTATTTTGAAAAGGCCATGATTCACTTACACGTCCCTGCAGGTGCAACGCCTAAAGATGGCCCTAGCGCGGGAATTACCATGGCCAGTGCTTTACTATCACTTGCGTCTAAGAAACAGGTAAACCGTTCAATTGCCATGACGGGTGAATTAACTTTAACAGGGCATGTGTTACCGATTGGTGGTGTGAGAGAAAAAATTATTGCTGCTAAGCGGGTTAAAATTCATGAGGTTATTTTACCTGATGCTAACAAACGGGATTATGATGAATTGCCTGATTATGTACGTGAAGAAGCGATTTTAGTGTCAGAAGGACAAGACATTGAAGGCAGCTTCTGGGGTGATAGCGAAGCAGGTTTAGTTGAAAATCGTTTGTATGTACGTGACGATACTCCTGTTCATTCTGCTTTACATGAAGCTTGTCATTATATTTGTATGGATGCTGGACGACGCAATGCGTTACATACAGATGCAGGTGGTGATTATGATGAAGAGAATGGGGTTTGTTATTTACAAATTCTATTGTCTGAACATTTACCTAATGTCACTAAACAAAAAGCATGGGCGGATATGGATGCGTGGGGTTACAGTTTCCGCTTAGGTTCAACACAAGCATGGTTTGAGCAAGATGCAGAAGATGCACGCCAGTGGTTATTGAAATATGATTTGATTGATACGCAAGATCAGCCTACTTGGAAGTTGCGTCAAACATAG

Transcript

ANN20825-RA

Protein

Uniprot

Uniprot term	Description
A0L516	Lon protease OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=lon PE=3 SV=1
Q31FD3	Lon protease 2 OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=lon2 PE=3 SV=2
Q3A701	Lon protease 1 OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=lon1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05362	Lon_C	Lon protease (S16) C-terminal proteolytic domain	Domain	Interproscan
PF02190	LON_substr_bdg	ATP-dependent protease La (LON) substrate-binding domain	Family	Interproscan
PF01724	DUF29	Domain of unknown function DUF29	Family	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008269	Domain	Peptidase S16, Lon proteolytic domain	Interproscan
IPR027543	Family	Lon protease, bacterial	Interproscan
IPR027065	Family	Lon protease	Interproscan
IPR015947	Homologous_superfamily	PUA-like superfamily	Interproscan
IPR008268	Active_site	Peptidase S16, active site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003111	Domain	Lon protease, N-terminal domain	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR046336	Homologous_superfamily	Lon protease, N-terminal domain superfamily	Interproscan
IPR004815	Family	Lon protease, bacterial/eukaryotic-type	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43718	LON PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0006515	Biological Process	protein quality control for misfolded or incompletely synthesized proteins	Interproscan
GO:0030163	Biological Process	protein catabolic process	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01338	lon; ATP-dependent Lon protease	EC:3.4.21.53	Peptidases and inhibitors	ko01002	deepkoala