Gene detail

Detailed information of ANN20834-RA in Montipora grisea

Genomic Location: Scaffold_19__1_contigs__length_4594208:1649685...1652678
NR annotation: NJO16982.1, response regulator [Thioploca sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN20834-RA

ATGGACTTAGAAGCCTTGAAAGCCCAGCTGGGTGGCAAAATGGATTTATATCTTATTAACCAAGAAGGCATTGTTGAATACACCACTTATCCGCAAGATTTAAATCTAAATTTTAAAGAAAAAACCCCTGAATTCTACAAAGTGCTGCAAGATATTTTTGAAACAGGTCGTTTTGCTGATGGTGATTTTGGGACAGAAGCGCGGACAGGTGTGTTTCGTAAATATGCGTATATGCCAACGCCTGACAGGAAATATGTTTTAGAGTTTGGTCTTGTTTCTGATGAATTTTCACGTTTAATTGGTGAATTGGATTTAACTAAGATTACTTCCCGTTTACGTACCATCAATCCCACTTTGGATAAAGTGCGTATCTTCAGTCAGCATGGCCATGTCATTGGGTCAGAGAAAGGTAAGCAAGCCTCTGAAACAGTTGTCAGTATTGTCAAAAGTGTTTATGAAACCAAAACCCCTTACGAATATTATAACTCTCAAAGAAAATCATTAACTCGCTATCTATTTTTAAATTTAAAGAAAGAGAACTCTGCTTCTGATCCCAGCAAAGTCATTGAATTAACTTATAATACTAAACTAGTCGATCAGGGTTTAGAACGCATTGCGACATTTCATACCTTCTTAGGCATTATTGCGATTTTATTAAGTATTTTATTCACTTTTCTGATTTCAGCATGGATTACTTATCCTATTCGCCGCATTGTGCGTAGTGTGAATCTGATTGCGCAAGGTGATTTATACCATCCGATTGAAGTTAAAACCAATAATGAGTTAAAACTGCTGAAGCAAAGTATTACCATTATGGTGAATAATCTGCTCAAATACATGAAACAAGTCGAGCAGCAGAATGAAAATCTGAAAGAATTAGATCGTCTGAAAGATGATTTTTTATCCAACACTTCCCACGAGTTACGTACGCCAATCAATGGCATTATTGGTATTGCTGAATCAATGCTCGATGGTGTTGCGGGTAAATTGCCGCCTAAAGCCGTTGAAAACTTATCGATGATTGTATTTAGTGGTCGTCGACTGGCTAACTTAGTTAATGATATTTTAGATTTTTCCAAGCTGAAACATAAGAGTATTGCCTTACAAATCAGACCAATAGAAGTCAAAGTATTAGCAGATGTGGTAATTACTTTATCTCAGCCTTTAATTGGTAAAAAACCGATAGAATTGGTCAATAGCATTGAACAAGACATTATTGTGGATGCGGATGAAAATCGGGTACAACAAATTTTACATAATTTACTTGGCAATGCAGTGAAATTTACCGATGAAGGTCAAGTTGATGTTTCCGCGTCTCAATTTAGTGAAGGCTGGTTGATGATTTCTGTGACTGATACAGGTTTGGGTATTCCACGAGAAAAATTGTCCACGGTATTTAACCCATTTGAGCAAGCAGATGGCTCAATTTCGCGTGAATTTGGTGGTACAGGTTTAGGGCTTTCAATTACAAAACAATTAGTTGAATTGCATGGTGGTGAAATTCGCATCCAGTCGACAGAAGGACATGGCACACGGGTCAGCTTTACTTTGCCATTATCTACCACTGATACCGCTGCTCATGGTGACGAAACGGAAACCTTGTTGGAACGCTTGCGTGAACCAACCGCTACACCGCCGATGCTTACAGCAAATGTGATTGATATTGATAAAGATACTGAAAAAGAAGCAGATGAGCCTGCCATTTTCTTGGATGAAGATACACAAGAAATTCAGCAGATTAAATTAGATGAAATGCTTAGCGTGCTGATTGTTGATGATGATCCAGTCAATTTGCAAGTATTGGAAAATCAGTTAACGATTGAAAACTATTCAGTCACGCGGGCACTAAATGGGCCTGAAGCGTTGGAAGCGATTGATAAAGAAAAATTTGCAGTGGTGTTATTGGATATTATGATGCCGAAAATGTCAGGTTTTGAAGTCTGTCGTATTATTCGTGAACGCTATCCCGTGACGCAATTGCCTGTAATCATGTTAACTGCCAAAAACCAAGTGGCTGATTTAGTTCAAGGTTTAGAATCTGGAGCTAATGATTATTTGACCAAGCCATTCTCAAAAGGTGAATTACTGGCACGGATTAAAACCCATATTCAATTGTCTCGAATCAATATCGCTTACAGTCATTTTGTGCCTTTAGAATTTTTACAATTGCTTGAAAAAGAAAGTATTGTTGATGTGAGATTAGGCGATCATGTACAGAAAAATATGACTGTGCTATTTGCAGATATTCGTTCATTCACCACCCTTTCTGAAAGTTTAACCCCAAAAGAAAACTTTGATTTTATTAATGAATATCTAGGCCGTGTCAGCCCACAAATTCGCAAATATAAAGGCTTTATTGATAAATATATTGGTGATGCGATTATGGCCTTATTCCCTGAAACAGTGGATTCAGCTGTTGATGCAGCCGTTGAGATTTTAAAACATTTAGAGATTTTAAATACCGAACGACTTCAAAGAGGGGAAAAAGCAATTAAAGTTGGTGTCGGTATGCATGTTGGTTCTTTGATGCTGGGTACGATTGGTGAAGAAAAACGCATGGAAGGCACGGTAATTTCTGATGCTGTGAATTTGGCTTCGCGCTTAGAAGGTCTGACTAAATTATATGGGGTGTCCATTCTCATCAGCCAAGATATTTTACAAAATATGGAAAACCCTGATGCACACTTTTATCGTTTCTTGGGTAAAGTCATTGTCAAGGGTAAACATGAACCAGTTCAAGTCTTTGAGCTCATTGATGCTGAGCCTGATCGTGATATTCGAGAAGCAAAAGTGACTCTTGAGCCAGAGTTTAATGCTGCTTTGAGCTTATATTATCAAGGCAATTTTGCACACGCGATTCCATTATTTGAACATATTTTATCTGTATTACCAGTTGATAAAGCAGCTGAGTTTTATTTAGGCCGTTGTCGCCACTATATTGAGGAAGGTACGCCAGAAGGCTGGGAAGGTGTTGAAGCCCTGACTGAGAAGTAG

Transcript

ANN20834-RA

Protein

Uniprot

Uniprot term	Description
Q87GU5	Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=luxQ PE=3 SV=1
Q5A599	Histidine protein kinase NIK1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=NIK1 PE=1 SV=3
Q54YZ9	Hybrid signal transduction histidine kinase J OS=Dictyostelium discoideum OX=44689 GN=dhkJ PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00512	HisKA	His Kinase A (phospho-acceptor) domain	Domain	Interproscan
PF00211	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan
PF00072	Response_reg	Response regulator receiver domain	Domain	Interproscan
PF02518	HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF00672	HAMP	HAMP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011006	Homologous_superfamily	CheY-like superfamily	Interproscan
IPR001054	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR036890	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR003661	Domain	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR001789	Domain	Signal transduction response regulator, receiver domain	Interproscan
IPR005467	Domain	Histidine kinase domain	Interproscan
IPR003594	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR004358	Domain	Signal transduction histidine kinase-related protein, C-terminal	Interproscan
IPR003660	Domain	HAMP domain	Interproscan
IPR036097	Homologous_superfamily	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43047	TWO-COMPONENT HISTIDINE PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009190	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0000155	Molecular Function	phosphorelay sensor kinase activity	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0000160	Biological Process	phosphorelay signal transduction system	Interproscan
GO:0016310	Biological Process	phosphorylation	Interproscan
GO:0016772	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0009927	Molecular Function	histidine phosphotransfer kinase activity	Interproscan
GO:0046777	Biological Process	protein autophosphorylation	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan