Gene detail

Detailed information of ANN20919-RA in Montipora grisea

Genomic Location: Scaffold_19__1_contigs__length_4594208:2928105...2929539
NR annotation: WP_002685167.1, methionyl-tRNA formyltransferase [Beggiatoa alba]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q0I0S3	Methionyl-tRNA formyltransferase OS=Shewanella sp. (strain MR-7) OX=60481 GN=fmt PE=3 SV=1
Q31J85	Methionyl-tRNA formyltransferase OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=fmt PE=3 SV=1
B0TLC9	Methionyl-tRNA formyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) OX=458817 GN=fmt PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02911	Formyl_trans_C	Formyl transferase, C-terminal domain	Domain	Interproscan
PF01327	Pep_deformylase	Polypeptide deformylase	Domain	Interproscan
PF00551	Formyl_trans_N	Formyl transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041711	Domain	Methionyl-tRNA formyltransferase, N-terminal domain	Interproscan
IPR005793	Domain	Formyl transferase, C-terminal	Interproscan
IPR036821	Homologous_superfamily	Peptide deformylase superfamily	Interproscan
IPR037022	Homologous_superfamily	Formyl transferase, C-terminal domain superfamily	Interproscan
IPR001555	Active_site	Phosphoribosylglycinamide formyltransferase, active site	Interproscan
IPR011034	Homologous_superfamily	Formyl transferase-like, C-terminal domain superfamily	Interproscan
IPR005794	Family	Methionyl-tRNA formyltransferase	Interproscan
IPR023635	Family	Peptide deformylase	Interproscan
IPR036477	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR002376	Domain	Formyl transferase, N-terminal	Interproscan
IPR044135	Domain	Methionyl-tRNA formyltransferase, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11138	METHIONYL-TRNA FORMYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004479	Molecular Function	methionyl-tRNA formyltransferase activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0071951	Biological Process	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0042586	Molecular Function	peptide deformylase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02416	fliM; flagellar motor switch protein FliM	-	Bacterial motility proteins	ko02035	deepkoala