Gene detail

Detailed information of ANN20932-RA in Nanomia septata

Genomic Location: chr8:35876179...35877951
NR annotation: XP_047127074.1, ran-binding protein 9 isoform X2 [Hydra vulgaris]
Species Nanomia septata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1L252	Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1
P69566	Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1
Q96S59	Ran-binding protein 9 OS=Homo sapiens OX=9606 GN=RANBP9 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006439 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00622 all species →	SPRY	SPRY domain	Family	Interproscan
PF10607 all species →	CTLH	CTLH/CRA C-terminal to LisH motif domain	Domain	Interproscan
PF08513 all species →	LisH	LisH	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006594 all species →	Conserved_site	LIS1 homology motif	Interproscan
IPR003877 all species →	Domain	SPRY domain	Interproscan
IPR001870 all species →	Domain	B30.2/SPRY domain	Interproscan
IPR006595 all species →	Domain	CTLH, C-terminal LisH motif	Interproscan
IPR035782 all species →	Domain	Ran binding protein 9/10, SPRY domain	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR050618 all species →	Family	Ubiquitination and Signaling Pathway Regulator	Interproscan
IPR043136 all species →	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR024964 all species →	Domain	CTLH/CRA C-terminal to LisH motif domain	Interproscan
IPR013144 all species →	Domain	CRA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12864 all species →	RAN BINDING PROTEIN 9-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23334	RANBP9_10, RANBPM; Ran-binding protein 9/10	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.