Gene detail

Detailed information of ANN21105-RA in Montipora grisea

Genomic Location: Scaffold_15__1_contigs__length_9942800:1118203...1119066
NR annotation: CAI3971585.1, unnamed protein product [Cladocopium goreaui]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7UIC6	Small ribosomal subunit protein uS11 OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=rpsK PE=3 SV=1
Q7UIC7	Small ribosomal subunit protein uS13 OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=rpsM PE=3 SV=1
B8FER1	Small ribosomal subunit protein uS11 OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rpsK PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00416	Ribosomal_S13	Ribosomal protein S13/S18	Family	Interproscan
PF00411	Ribosomal_S11	Ribosomal protein S11	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019980	Family	Small ribosomal subunit protein uS13, bacterial-type	Interproscan
IPR010979	Homologous_superfamily	Small ribosomal subunit protein uS13-like, H2TH	Interproscan
IPR001892	Family	Small ribosomal subunit protein uS13	Interproscan
IPR001971	Family	Small ribosomal subunit protein uS11	Interproscan
IPR027437	Homologous_superfamily	Small ribosomal subunit protein uS13, C-terminal	Interproscan
IPR018269	Conserved_site	Small ribosomal subunit protein uS13, conserved site	Interproscan
IPR036967	Homologous_superfamily	Small ribosomal subunit protein uS11 superfamily	Interproscan
IPR019981	Family	Small ribosomal subunit protein uS11, bacterial-type	Interproscan
IPR018102	Conserved_site	Small ribosomal subunit protein uS11, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0022627	Cellular Component	cytosolic small ribosomal subunit	Interproscan