Gene detail

Detailed information of ANN21203-RA in Montipora grisea

Genomic Location: Scaffold_15__1_contigs__length_9942800:3664482...3667890
NR annotation: WP_165228805.1, S8 family peptidase [Aquisphaera sp. JC669]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN21203-RA

ATGGATGCTGCGGTTGGAATCTCAATCGGGAAACTCGTCGACGCTGCAATGGCCGGCCAAAAGGAGGAAATTGCTGCTTATGCTGAACAGATTTCTTCGCTGTTTAAGGAGGCTGGTGACAACGAGACGGCAAAGCGAATTATGTCGTCCGTAAAAGGGGCGTCCTCAAAAACAGCCAGCCTCACTCGCGGCGTCAAGGTGTCAAACCGACCGGTGCCTGTAGACCCTGATTCTCGTCTACCCTTGGCAGACGAAATCAATGTCCAATCTGAGCCCGTTGTAGTTACTTCGGACTTAGTTGATCGAACCGTGAACCGCTTTTTGGAATCACACGCAAACGCTGATCGCCTTACAGAACATGGGCTTTCGGTTCCAAAGTCGATGCTGCTCTACGGTCCGCCTGGATGTGGCAAAACGATCCTTGCAAAGAAGATCGCATTCAGACTTGGATTCCCAATATTGCTTGCACGCTCGGATAGCTTAATTTCGTCTTACTTGGGGAATACTGCGAAGAATGTTCGCGCCCTGTTCAATTATGCGGCATCGAAACCATGCATTTTGTTTCTTGACGAAATCGACTCACTCGCCAAGATGCGTGACGACGAACGTGAACTTGGTGAGTTGAAGCGGGTTGTTATTAGCCTCCTAGAAAACATAGACGCATCTCAGCATGATTTCATCATGCTGGCCGCCACAAATCATGAGCATTTGCTCGACCCTGCGGTGTGGCGACGGTTCGATACAACGGTCAATATCGAGAAGCCTGATGTTGAAGCTCGCGCTAAACTTCTGCGTACATTTTTTGGCTCAGCGGTTGACGAGACACAGGCCGATGTCTTGGCGTGCATGACGAATGACTTTAGCTGCGCTTCGCTGAAACAACTTTCTGAAGATATCATTCGTGATGCTGTCTTAGCCGGATCGGGTTCAGTTGAAACCCCGCGAGCCATCAGTCTTCTCTTTGAACAGCAAAACATTGCCTTTGACGACGGCGTCCCCGAAGCGATCCGCAGTGTCCGCAACGCCGTCGGAAAGAAGGTGACGCAGAAGCAACTCGGAATCATGTTCGGTATCTCCCAGTCGCAGTTCGTGGTCGGCCAAAAGAACGACTACTGGAGCAATGATCCGCCTGGCAGCGTGGCATTTGATCCCGTTGTTATCGTCACTCAGGAATTTCGCCAAGGCTTGGCGGAGCAGGTTGATCGCGTTTCAAAATCTTTATCAGAAACCCTCTCCAAGTCGCCCAACATGCCAGCCGTGGCAAAAGTGAACCTTCATGGGCGAGCCCTCGCGAAATCCAAACGCCCAACATCCATTTTCAACACAAAAACCTGTCCCATTGTCGGGGGCGGCGATCTTGGAGAGATGTTCGTGTACGTCAATCCGCAGCGGCTGGGACGCTTGCGTGACCGTATTCTTGCAGGGACGGAGCGAGCGAACGAATCACATGTATCCACGATTGAAAGTATTAAACCTTACGGCCTTTCGGATGTTGTTGGGAAGGATGTCAGCGTTGGCGACCTCGAAAGGGTGACGGAAGCGGGAGAGACTTTAGCGGTTCGATTGTTCGACTTCCACAGCGAGACACTGGATTCGTTGACTAAGCGTGGATTTGAGGCACTGCTTGAACAACGCGGAATCCGTTTCGAGACATTGGACTATTGTGAACGATTAAAGCTCTACGAGATTCGACCAAAGTCAGCCACAGACATCGCAACTGTTGCATCAATGCCCGTTACCCAATCTGTTGCACCATTTGCTTCGTACAGCTTGGTGCGAACAGCGTCCCGTGCGCTCGAGCCGATTCCCAAGAACCTATTCGCTGCACCTGATCCTCTCGTGAAGTATCCAACTGTAGGCGTAATCGACTCCGGTACTGACCCGAGCAACCCTCATCTTACGCCGTGGGTCGTGGACCGTTGGGATTTTGTTCCCCAAAGTCTACAGGACAATTCCCACGGAAGTTTTGTTGCAGGGTTGATTATCAATTCGCGAGCAATGAATCACGCAGATGTTCGTTTTCCCTCGACTGCTGCGAGGATCGTGGATGTCGTCGCGTTTGACAGGAATGGTCATGCCAAAGAACCTGACCTAATTCGGATTGTAAAAGAAAGCGTAAAGAAGTATCCCAGCGTGAAAACATGGAACCTCTCGTTTTCTGTCTCAAATAGGGTTTGCCGCAACGATACGTTTTCTGCGTTTGGATTGGTACTCGCCGAATTGGCTGAAAAGAATGGCGTAGTGTTCGTGGTCGCTGCAGGGAACGTGTCAGCCAATGGAAGGAATTGGCCACGTACCGCCGACCCCACTGACGGAGATCGAATATGTGCCCCAGCCGATAGCCCGACCGCGATTACCGTTGGTTCGCTTGCACATCGCGAAACTGCCGCCACGTGTGTGAAATCGGAGCAACCCTCGCCGTTTTCTCGACGTGGTCCAGGAACTGCCCGATTGATTGCTCCTCACGTATCACACTACGGGGGAAACTGCGCTCCAGACCACACCTATACACAAACTGGCGTCATTTCGGTCGATGCCAAAGGCAATCTGGCAGAGGATGTTGGAACAAGTTTTTCGACACCGTTGATTTCTTCGTTGTCAGCAAATGTGCAGGAGTCGCTATTAGCGAACGACCGCCCCGATTTGCTGACAAAAGCAATGCTTTTTCACAGTTCATTTGTTCGCAATCAAAAGCTGGATGCGGACCTACTCGACCACGCTGGTGTTGGTGTGCCACCAGATGTGGGTGATGTGCTGTATTGCCAGCAACATTCTGCGACGATTGTCTTCTCCGTTGATCTTGCAAAGCAACCGAACATCACGAAACAGGATTTTCCGATTCCTTCCTGCTTGATAGCCGGCGACGCCGTCGTAGGCGAGTTCTCAATGACCCTAGTGTATTCCCCTCCCATGGACGTGAGCGCAGGATTTGAATGTTGTCAAACGAATGTTGAAGCCTTGCTTGGGACGATTCATCCTGAATCCGGTAAGCTTGTCCCTCAGGTTCGCCCATTTCCAAAATTTGAAACGTCCGGCTGGGAAAGTGATCTCATCAAGAACGGCTTCAAGTGGTCACCATATAAATTCTATCGCCGAACACTCGACACTCGAAACAAACTTGCAGGACAACCATGGGAACTAAGGTTGAAGCGGCAAAGACGAGTCGGGCATTTCGAGATGCCAGAATCACATATGGTCTATCTTTTGATCACTCTCGGTTCACCCGGTGGAAGCGATGATCCAAAATGGAAAATTTACGATGAACTCGTTCAAAATATGGATCAATTGGGATGGGGGCCAATCGACGTGAGATTGGACGCTCGTGTTCGTAGCCGAGGCAGGAGTTAG

Transcript

ANN21203-RA

Protein

Uniprot

Uniprot term	Description
P55530	Uncharacterized AAA family ATPase y4kL OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a02840 PE=3 SV=1
P62333	26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1
P62335	26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=PSMC6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00082	Peptidase_S8	Subtilase family	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050221	Family	26S Proteasome Regulatory ATPase	Interproscan
IPR034074	Domain	Y4bN, peptidase domain	Interproscan
IPR036852	Homologous_superfamily	Peptidase S8/S53 domain superfamily	Interproscan
IPR015500	Family	Peptidase S8, subtilisin-related	Interproscan
IPR000209	Domain	Peptidase S8/S53 domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008540	Cellular Component	proteasome regulatory particle, base subcomplex	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0031597	Cellular Component	cytosolic proteasome complex	Interproscan
GO:0036402	Molecular Function	proteasome-activating activity	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0045899	Biological Process	positive regulation of RNA polymerase II transcription preinitiation complex assembly	Interproscan
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008236	Molecular Function	serine-type peptidase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan