Gene detail

Detailed information of ANN21300-RA in Montipora grisea

Genomic Location: Scaffold_15__1_contigs__length_9942800:6336729...6340292
NR annotation: MCA9068467.1, protein kinase [Planctomycetaceae bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN21300-RA

ATGCTTTTGCTGATGGAAGAGAACGCGCCGGACGTTGACCCCCATCACGAATCAAAGTCAAAGCTCGAACGACTAGGCGATTTCCGAATCCTGCGTGAAATCGGCCGAGGTGGCATGGGAGTCGTTTACGAGGCGGTCCAGGAATCACTCGGACGGCAGGTGGCACTCAAAGTCTGTCCACTCACATCGCGATTGAGCATGCGAAACCGAGAACGCTTTCGGCGTGAATCGCGAGCCGCGGCGATGCTTCACCACACCAACATCGTCCCCGTCTTCGCCGTCGGCGAAGATGAAGGGAATCTGTACTACGCGATGCAATACATTCGTGGTGCAACATTGGACGATGTGATCACGGAATTGCGAATGATCTGGCAGTCGTCGACCTCGGCCAGCACCAATTTGTCGAATGTCCGGGTCAATCGTGCGGCGGTTGCGGAACAGCCTGCCTCCGAAGTCGCCAAGTCGTTGGCCGAAAGACAAGTGGTCGATCCATCTGAGGCGGAACGATCGCAAGCGGAATCAGCCGAGATCAGTTTGCCAGGAGCTTCCAATGCCGATTCGCAATCGGGTTCGTTTCGCTACTGGGACAGCGTGGCTCGGGTGGGTCTGCAAGTTTCCGATGCGCTGGACTACGCGCACGGGCAGGGCACCTTGCATCGCGATATCAAGCCCGCCAATTTGATGTTGGATGCCACCGGCGCGGTTTGGGTGATGGACTTCGGGTTGGCCAAATCACTGGAAGAAGAAAACCTTACCCAGACGGGAGAATTGATTGGCACGATTCGATACATGTCACCGGAACAGTGCGCGGGCGAACCCGATCAACGCAGTGACATTTATGGTCTTGGTCTGACGCTCTATGAGATGCTCGCCCTGCGGCCGGCTTTCGAGGAACTCAATCGTGGCAAGCTGCTTCGCGTGATTGCCGAACAGGACCCTACCTCGCTGCGCAAAATCAATCCTCAGATCCCTCGTGATCTAGAAACGATTCTCTTCAAGTGCATCGATCGTGAGCCAGCCCGTCGCTACCAAACCGCCAGCGATTTGCATGACGATCTCCTTCGGTTTCTACAGCGACAACCCATTCGAGCGCGTCCGATTGGCCCGGCAGAACGAATCGGCAAGTGGGTCCGTCGCCGTCCGCTGGTGGCGGCTTTGGCGACTTCGCTGGCACTGCTGCTTTGTCTGTCGCTTCCGCTGATCACCTGGAACTGGCTTGCTGCTCGCACTGCTCGGGACGACGCGATTGCCAGTGCAAAGAAAGCCACTCGGTTAGCCAGGTCAGAAGGGATCGCCTTGCAGAAGGCTTCGCGGCAAACAAAGTTGGCCAAGCAACGGTTCACAGAAAGTGAGCAAGCCCGCCAACAAGCCGAAGACGCTTTGTACCGCAGTGCCATTCGTCGCATCGAACTGACGACTCGTACCAACATGAACGAAGCCCGCCAGGTCCTGGCCAGCTTGAAAGAACAAGCTCATGAGCGTTGGGAATGGGGCTATCTGAACAAACTCGTTCATCAAGAGAAGTGGATGCTGCCAGCCGGTTCCGATGAAGCCGCCTGGATTTGGGCACTCGAATTCAGTCGTGACGAAACACTGCTCGCTGTCGGCGCCGGTCGAGCCGGTTTTATCTTGCCACGTTCCTCGCCGCGTGGACGCGTCACGATATGGGACATGAGATCGGGAGCACTGGTGGCGGAATTACCGATCTTCCATTCCGGCTATGCCTTGGCGTTCAGCCCAGACAACAGGACACTTGCGGTGAGCGAACCGTATGCCGCCACCCAATTCGAAAATGACTGGCGGAATTTGGGACCAGCCGCCGATGGCTCACCCCGCGGTCAGGTTTGCCTTTGGAATGTGACCGACCGAAAGGTCATCACGGAGCTGGAACTGCCCGAGGATCACCGGGTTAGCAAGCTTGCCTTCACTGCTGCCGGAACTCATGTGGTGGGGACGTTGTGGCGACGGCAATACAAAAAGCCAGCCGAAGTTGTGGTTTGGGATCGCGGCAGCGGCAAAAAATTGACGTCGCTGCCCAACGCGGAGTTTTTGTCGTGTGTTGACGAAGACGTGATGCTTGCGGTTCGAAACGACCAACAGATTCAAATTTCGCGGTACGCGATCGAGCCGGGTTCGGAACAACCGCTACAGCAACGCAGTACTGAAAACACATTGCCGTTGTCAGCAAACGGCGTCATCCACGTGCCGGATCCAAGCCAGCAACGCCCCGCCCTGCATCTTTGGCTCAACACGACAGGCCAACTGACGCTACAAGATCTCGATTCCGGTCGCAGTCAACGTTTGTGGGGTGACGATCTTTTCAAGGTACAAGGACGCGCCTTCTGGCGTCCAATCTGTGCGTTTCATCCACAGCAAGCTCGGCTTGCGACAGGGGCAGCGAACGATGGAACGGTGCGACTTTGGTCCAGTGATGACGAAGTCCTGGGCGTGGTCTATGACGATCATGTCGTGCAAAGAATCCTGCGGGGGCATTCGGCTCCGGTCCAAAGCTTGGCTTACAGCTCCACCGGTCAGCTGTTGGCATCGGGCGATTGGTCAGGAGAAGTGCGAGTTTGGCAACCCGAAAAACGAACACACCAAGTCGATACCCAGTTGATGCCAACCGGCACGAAAGGCTCGGTGGTGGAGGCGATTGCCTTTGGTCGCGATGGAACTCGAGTCTTGGCTTGCCAGTCACATGCCGGCACAGTCGCGTCGATTGACTACGAACAAGAAATGATCGTGGAAGTGGAATCCAGCAAGATTCCGAGGGCTTCTTTTGAGGTCAGGAATCGCGAAGCTGCCTTCGATGATCGAGGTCAAGTCCTGGTCACCCTGCCTCTGCGGCAGCACTCTTCGCTCCACATCACCAACCTCACGACAGGCGAAACCAAACGCCTGGACAATCTGCCTGAACCGATCCGAGAAGTCGCGATCAGCGGAATGGGTAACCGCTGCGCCACCGCCACGGTGGACGAAGAAGACCAACGATCTGATTCCAATTGCCAAATCGCTGTCTGGGATATTGCAGCGACTCCGCCAGCCCAACCAATATGGACTGACTCTCGGCCCGGTGGTTGTGTCACAGCGATCGCACTGAACCGCCAGGGCACGCGTCTCGCAGTCGCTGGTTTTGACGCTGGTCAACGAGCAAGCCGTTTGGACGTATACGACATCGCAACGAATCGGCATATCCAGTTGAGCGGTCTGAGGACAACCGTTTCTGCGGTTCGCTTCCACCCAGAAGGTTCATTACTGGCCGCTTGCACGGAAGCGGGGCCTGGTGCGATCTTTGATTGCGAAAGTGGCAAACGGCTGGCCACCTTCTCGAGTCCGGGTGGCGTACAAGATTTGGATTGGCACCCCGATGGCTCACGACTCGTCGGCGCGAACCGCGAAGTCGTGACGGTCTGGGATCATCAAGGCCATCACCTCATTTCGCTCAAGTCAGATCCCCGCTTTGGAGATGTGCAATGGGATCCCACCGTCCGTTTCAGCCCGGATGGAAAGTTGATCGCGGCAACTCAATGGAATAACAAGATCCGAGTCTGGAAATCCCGTTAA

Transcript

ANN21300-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P54737	Serine/threonine-protein kinase pkn5 OS=Myxococcus xanthus OX=34 GN=pkn5 PE=2 SV=1
Q6MAN0	Serine/threonine-protein kinase PknD OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=pknD PE=3 SV=1
Q8G6P9	Probable serine/threonine-protein kinase PknB OS=Bifidobacterium longum (strain NCC 2705) OX=206672 GN=pknB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0233648 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43289 all species →	MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12132	prkC, stkP; eukaryotic-like serine/threonine-protein kinase	EC:2.7.11.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.