Detailed information of ANN21351-RA in Nanomia septata

Genomic Location: chr8:60106578...60127322
NR annotation: ARX80207.1, notch-a [Hydractinia echinata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R172Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus OX=10116 GN=Notch3 PE=2 SV=2
Q61982Neurogenic locus notch homolog protein 3 OS=Mus musculus OX=10090 GN=Notch3 PE=1 SV=1
Q04721Neurogenic locus notch homolog protein 2 OS=Homo sapiens OX=9606 GN=NOTCH2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00066NotchLNR domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000800DomainNotch domainInterproscan
IPR011656DomainNotch, NODP domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan

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