Detailed information of ANN21368-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:29553290...29614460
NR annotation: CAH3021269.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10493Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2
P14543Nidogen-1 OS=Homo sapiens OX=9606 GN=NID1 PE=1 SV=3
Q8TER0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF07474G2FG2F domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR006605DomainG2 nidogen/fibulin G2FInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR003886DomainNIDO domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR003645DomainFollistatin-like, N-terminalInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan

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