Gene detail

Detailed information of ANN21388-RA in Montipora grisea

Genomic Location: Scaffold_15__1_contigs__length_9942800:8184491...8186323
NR annotation: HBV61960.1, elongation factor 4 [Rhodopirellula sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7UX15	Elongation factor 4 1 OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=lepA1 PE=3 SV=1
B0TAD2	Elongation factor 4 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) OX=498761 GN=lepA PE=3 SV=1
Q8RB72	Elongation factor 4 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=lepA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03144	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan
PF06421	LepA_C	GTP-binding protein LepA C-terminus	Family	Interproscan
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF00679	EFG_C	Elongation factor G C-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006297	Family	Elongation factor 4	Interproscan
IPR038363	Homologous_superfamily	LepA, C-terminal domain superfamily	Interproscan
IPR035647	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR035654	Domain	Elongation factor 4, domain IV	Interproscan
IPR004161	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR013842	Domain	GTP-binding protein LepA, C-terminal	Interproscan
IPR000640	Domain	Elongation factor EFG, domain V-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43512	TRANSLATION FACTOR GUF1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:0045727	Biological Process	positive regulation of translation	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03596	lepA; GTP-binding protein LepA	-	Legionellosis	ko05134	deepkoala