Gene detail

Detailed information of ANN21468-RA in Montipora grisea

Genomic Location: Scaffold_17__1_contigs__length_5665553:111722...114162
NR annotation: RKU39563.1, phosphoglycerate kinase [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN21468-RA

ATGAACCTCCACGAATACCAAGCCAAACAAATCTTAGAATCCTACGGCGTTAATACGCTACCCGGCAAGGTCGCCGAAACCCCAGAGGAAGCGGAAACTATCGCGCATGAACTGAATTGCCCCACCTACGTTATCAAAGCACAAATCCACGCCGGTGGACGCGGAAAGGGAGGCGGTGTCAAACTCGCACACTCACCCGCTGAAGTGAAACAACAGGCCGAAGCGATCCTCGGCATGCAACTCGTAACACCACAGACGGGTCCCGAAGGAAAACTTGTCCGAAAAGTGCTTATCGCTGAAGCCGCAAAGATAGAAAAAGAATTCTATCTCGCCATACTCCTCGACCGGGAAACCTCTCAAATCACCGTAATTGGCAGCGAAGAGGGTGGGGTCAATATTGAGGAAGTTGCGGCACAAACACCCGAAAAAATCATTAGGACACACGCACATCCTGCCTTCGGATTAACTGAGTTCCAAGCGCGAACGTTCGCATATAAACTGATCACTGATGCCACCTATCGTCCTATTATCCCGAAAACAGTGGAACTCATCTTAGCACTTTACAACGCCTTTACAACGTGTGATTGCTCACTCGTAGAAATTAACCCGTTGGCAATCGTAACAACAGGCAGTGAATTAGATATTGTTGCCCTCGACTCCAAAGTCAACCTTGACGATAACTCACTCTGGCGGCATTCCGATCTTTCTGCGATGCGTGACCCACACGAGGAAGATCCGAGTGAATTAGAAGCAAATGAATCCGGCTTGAGTTATATTCGTCTTAATGGTGACATCGGTTGTATGGTGAACGGTGCTGGACTTGCTATGGCAACAATGGACATCATCAAACAGAACGGCGGCGAACCTGCAAATTTTCTTGATGTTGGCGGCGGTGCATCTGTAGAAGCGGTCGCGCACGCCTTTCGTCTTATACTCGCAGACGAAAATGTGAAATCCGTTCTCGTTAACATCTTCGGCGGAATTATGAAATGCGACACAATCGCGAACGGCATCGTCGGGGCAGCAGAACAAGTCAAACTCAAGGTTCCGATCGTGGTACGGCTGGAAGGCACAAATGTGGAACTCGGAAAACAGATTATTGCTGAATCAGACTTGAACGTCCAACTGGCAGATGGGCTCTCTGAAGCAGCACAACTTGCAATAAAACTTACAGAAAACTTAGGCTTCGGGAGAACTATACACGTGGCAAAACTTAAATTAAAGGATATAGACGTTACAGGAAAACGGGTTCTCGTGCGGGTGGATTTCAACGTCCCGATGCAGGACGGAAAGATCACAGATGAAACCCGTATCACCGCCGCCTTGCCGACACTTCTGTCCCTCATTAACGCTGATGCCAGAACCATCTTGGTGACACACTTAGGCAGACCTGAAATAGGTTCAACAACCGATCAAGATAGATTCACGACTGAGCCAATCGCCGTGGCACTTAGTCAGAAACTGGGTAAGCGCGTTGCCCATGTCAATGATTGCATCGGTGAGTCTGTGCAAAGTGCTGTCGCTTCGATGCACAATGGTGAAGTACTGCTTCTTGAGAATGTCCGATTCTATGCTGAAGAAACCGAGAACGACCCGGGATTTGCACAAGAACTCGCCTCGCTTGCGGATGTCTATGTTAACGATGCTTTTGGCACAGCACACCGCGCACACGCCTCAACGGAGGGTGTGACACATTATCTGAATCCGTGTGTCGCTGGATCCCTGATGGCACGTGAAATCTACTACCTCAGTACTACCCTTGAAAAACCTGAACGTCCCTATGTCGCTATTCTCGGTGGTGCCAAAATATCCGACAAAATCACACTAATTGAGAACCTCCTTGGGAAAGTTGATAAACTCCTCATTGGAGGCGGCATGACATATACATTTCTATCAGCGATGGGGTTCAGCATCGGTAACTCGATTGTTGAAACCGAAAAACTTGACGTTGCGAAATCACTGATCGAAAGGGTAGCATTCTCAGAATCTGTTTTCCTACCAGTGGACCATACTGTAGGACAAGACTTCGACCCTGAAACTGAATCTCAGATTGTCAACCAAGGAGCCATTCCGGATGGATGGCAGGGATTAGATATCGGCCCCGAAACAGTGACTGCTTTTGGTGAACAGATCGCAGCTGCGAAAACGGTGGTGTGGAACGGTCCCTTAGGTGTATATGAATTTGAGAAGTTCGCACAAGGTACAATTGCGATAGCAAAACAGATCGCCGAATCGGAATCAGTGAGCATCATCGGCGGTGGCGACTGTGTTGCAGCGATACAGCAAGCCGGTGTCACAGAGCGGATGACGCATATCTCAACAGGAGGCGGTGCATCCTTGGAATTTTTAGAAGGAAAATCTTTACCCGGTATTGCCGCTTTAACAGACAATTGA

Transcript

ANN21468-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2RLU1	Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=pgk PE=3 SV=1
Q2IIC1	Succinate--CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=sucC PE=3 SV=1
Q67SW6	Phosphoglycerate kinase OS=Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T) OX=292459 GN=pgk PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002908 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00162 all species →	PGK	Phosphoglycerate kinase	Domain	Interproscan
PF00549 all species →	Ligase_CoA	CoA-ligase	Domain	Interproscan
PF08442 all species →	ATP-grasp_2	ATP-grasp domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001576 all species →	Family	Phosphoglycerate kinase	Interproscan
IPR005809 all species →	Family	Succinate--CoA ligase-like, beta subunit	Interproscan
IPR013815 all species →	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR017866 all species →	Conserved_site	Succinyl-CoA synthetase, beta subunit, conserved site	Interproscan
IPR005811 all species →	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR013650 all species →	Domain	ATP-grasp fold, succinyl-CoA synthetase-type	Interproscan
IPR015911 all species →	Conserved_site	Phosphoglycerate kinase, conserved site	Interproscan
IPR036043 all species →	Homologous_superfamily	Phosphoglycerate kinase superfamily	Interproscan
IPR015824 all species →	Homologous_superfamily	Phosphoglycerate kinase, N-terminal	Interproscan
IPR016102 all species →	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11406 all species →	PHOSPHOGLYCERATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004618 all species →	Molecular Function	phosphoglycerate kinase activity	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006094 all species →	Biological Process	gluconeogenesis	Interproscan
GO:0043531 all species →	Molecular Function	ADP binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN21468-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.