Gene detail

Detailed information of ANN21553-RA in Montipora grisea

Genomic Location: Scaffold_17__1_contigs__length_5665553:1555644...1556852
NR annotation: MYK18752.1, GTPase HflX [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
D9R4W7	GTPase HflX OS=Lacrimispora saccharolytica (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) OX=610130 GN=hflX PE=3 SV=1
P25519	GTPase HflX OS=Escherichia coli (strain K12) OX=83333 GN=hflX PE=1 SV=3
Q8RAS5	GTPase HflX OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=hflX PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01926	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan
PF13167	GTP-bdg_N	GTP-binding GTPase N-terminal	Family	Interproscan
PF16360	GTP-bdg_M	GTP-binding GTPase Middle Region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042108	Homologous_superfamily	GTPase HflX, N-terminal domain superfamily	Interproscan
IPR006073	Domain	GTP binding domain	Interproscan
IPR016496	Family	GTPase HflX	Interproscan
IPR025121	Domain	GTPase HflX, N-terminal	Interproscan
IPR032305	Domain	GTP-binding protein, middle domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR030394	Domain	HflX-type guanine nucleotide-binding (G) domain	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10229	GTP-BINDING PROTEIN HFLX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03665	hflX; GTPase	-	Ribosome biogenesis	ko03009	deepkoala