Gene detail

Detailed information of ANN21578-RA in Nanomia septata

Genomic Location: chr8:77009977...77012935
NR annotation: KAG0502558.1, hypothetical protein HPP92_002630 [Vanilla planifolia]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9SSD2	Pre-mRNA-processing-splicing factor 8A OS=Arabidopsis thaliana OX=3702 GN=PRP8A PE=1 SV=1
Q8T295	Pre-mRNA-processing-splicing factor 8 homolog OS=Dictyostelium discoideum OX=44689 GN=prpf8 PE=3 SV=1
Q6P2Q9	Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08083	PROCN	PROCN (NUC071) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012592	Domain	PROCN domain	Interproscan
IPR027652	Family	Pre-mRNA-processing-splicing factor 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11140	PRE-MRNA SPLICING FACTOR PRP8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0000244	Biological Process	spliceosomal tri-snRNP complex assembly	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0005682	Cellular Component	U5 snRNP	Interproscan
GO:0017070	Molecular Function	U6 snRNA binding	Interproscan
GO:0030619	Molecular Function	U1 snRNA binding	Interproscan
GO:0030620	Molecular Function	U2 snRNA binding	Interproscan
GO:0030623	Molecular Function	U5 snRNA binding	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan
GO:0097157	Molecular Function	pre-mRNA intronic binding	Interproscan