Detailed information of ANN21849-RA in Montipora grisea

Genomic Location: Scaffold_20__1_contigs__length_3961929:1284578...1289819
NR annotation: MYB93493.1, lysine--tRNA ligase [Candidatus Poribacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5D5Q4Lysine--tRNA ligase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=lysS PE=3 SV=1
Q8R7N1Lysine--tRNA ligase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=lysS PE=3 SV=1
B0K5C0Lysine--tRNA ligase OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=lysS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02687FtsXFtsX-like permease familyFamilyInterproscan
PF13302Acetyltransf_3Acetyltransferase (GNAT) domainDomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF01063Aminotran_4Amino-transferase class IVDomainInterproscan
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF12704MacB_PCDMacB-like periplasmic core domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003838DomainABC3 transporter permease protein domainInterproscan
IPR002313FamilyLysine-tRNA ligase, class IIInterproscan
IPR000182DomainGNAT domainInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR018149DomainLysyl-tRNA synthetase, class II, C-terminalInterproscan
IPR043131Homologous_superfamilyBranched-chain-amino-acid aminotransferase-like, N-terminalInterproscan
IPR001544FamilyAminotransferase class IVInterproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR018300Conserved_siteAminotransferase, class IV, conserved siteInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR044136DomainLysine-tRNA ligase, class II, N-terminalInterproscan
IPR025857DomainMacB-like periplasmic core domainInterproscan
IPR043132Homologous_superfamilyBranched-chain-amino-acid aminotransferase-like, C-terminalInterproscan
IPR036038Homologous_superfamilyAminotransferase-like, PLP-dependent enzymesInterproscan
IPR005785FamilyBranched-chain amino acid aminotransferase IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42918LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0016747Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004084Molecular Functionbranched-chain-amino-acid transaminase activityInterproscan
GO:0009081Biological Processbranched-chain amino acid metabolic processInterproscan

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