Genomic Location: Scaffold_4__1_contigs__length_45231618:38982521...38998138
NR annotation: CAH3190075.1, unnamed protein product, partial [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families
| CDS |
| ANN21853-RA |
| Transcript |
| ANN21853-RA |
| Protein |
| ANN21853-RA |
| UniProt accession | Description |
|---|---|
| Q56X76 | DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2 |
| Q5VRY0 | DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1 |
| Q9NUL7 | Probable ATP-dependent RNA helicase DDX28 OS=Homo sapiens OX=9606 GN=DDX28 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004271 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 all species → | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014001 all species → | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR011545 all species → | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR014014 all species → | Domain | RNA helicase, DEAD-box type, Q motif | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47960 all species → | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0003729 all species → | Molecular Function | mRNA binding | Interproscan |
| GO:0003724 all species → | Molecular Function | RNA helicase activity | Interproscan |
ANN21853-RA.
