Gene detail

Detailed information of ANN21871-RA in Montipora grisea

Genomic Location: Scaffold_20__1_contigs__length_3961929:1648813...1651238
NR annotation: RKU24123.1, glutamate-1-semialdehyde-2,1-aminomutase [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN21871-RA

ATGATTACTTTAGGGCGTGACTCGCAAGCCCACATTGAAAAGCCTGTCTATCGCCCCAGGCGCCTTCGCGCACACGAAAACTTGCGGCGCTTAGTTCGGGAAACAACCTTGTCTGTGGACGACCTCATCTACCCGATGTTTGTTGTTCATGGGCATAATACAGCAACCGAAATTTCAGCGATGCCAGGGTGCTATCAATACTCAGTTGACACCCTCGTGAAGGCAGCGAAAGAACTCGCTACGCTGGGCATCCCCGGAACAATCTTGTTCGGAATTCCGGATACGAAGGATGCACTCGGCTCCGAGGCCTACGCTGACGACGGTATCATTCAGCAAGCTGTCCACGCCATTAAGGATGCCGTCCCCAACCTGCTTGTAATGACAGATGTCTGTCTCTGTGAATACACAGACCACGGCCACTGTGGTGTCATTGAAGCAGGTGAAGTTCAAAATGATCCGACGCTGGAATTGCTCGTTAAGGAGAGTCTGTCGCATGCGCGCGCCGGCGCCGATGTCATCGCCCCCTCAGATATGATGGATGGCCGCGTCGGAGCTATTCGCGACGCGTTAGACGAAAACGGATACGAAAACATACCAATTATGGCGTATGCTGCCAAATATGCTTCTGCTTTCTACGGTCCGTTTCGCGAAGCAGCCGAATCTACTCCGCAGTTTGGAGACAGACGTTCCTATCAGATGGATCCAGCAAATGCAGAAGAGGCGTTACGGGAAGTAGCATTGGATATTGAGGAAGGCGCGGACATTCTCATGGTTAAACCTGCACTCTCTTATCTTGATGTCATCCATCAAGTCAAAACAGAATTTCAGGTGCCGGTCGCTGCTTACAATGTCAGCGGTGAGTACGCGATGATTAAAGCAGCCTCGCAAAACGGCTGGATTGACGAACAGCGGGTCGCGCTTGAAGTATTGACCGGCATCAAACGCGCTGGTGCCGATATGATTTTAACCTACTTTGCAAAGTCCGTTGTGGAATGGCTGAATAGCAAATCCTTAGCCGCATGGCAAAAAGCACAGCAATTTATCCCTGGTGGTGTTAACAGCCCTGTACGCAACTTCAGTAAAGTGGGCAGGCATCCCTCCTTTATTGAACGTGGCAACGGCTCAAAAATCTACGACATTGATGGAAACGAACATATTGATTACGTTGCCTCCTGGGGGCCCTTGATTTTAGGGCATGCACATCCTAGCATTGTGGAGGCTATCGGTTCAGCAGCGTTACATGGGACCAGTTTTGGCGCGCCGACGACATTAGAGACAAAACTCGCTGAAGCCATTGTCAACGCAGTGCCCTCCATTGAACAAGTGCGTCTCGTTAATTCCGGGACCGAAGCCACAATGAGTGCAATCCGCGTCGCACGCGGGTATACCGGGCGCGATAAAATTATCAAAATTGATGGATGCTACCACGGCCATGTCGACTACTTGTTGGCAAAAGCCGGCTCTGGTGTCGCAACCTTCGGACTTTCCGATAGCGGCGGGGTACCAGAGGATTTTGCACGCAATACCCTGACTGTACCGTTTAACAATCCGGATGCCGTGAAGCAGGCAATTGAAGCCAATCCCAATGAAATTGCCTGTCTCATTCTGGAACCTATTATGGGGAACATGGGCATTATCCCACCCCGTGACGGTTACCTTAATGAACTGCGTGAAATTACCGAAGAACACGGCATTGTTCTCATTTTCGATGAAGTCATTACAGGCTTCCGGGTAGCTTATGGCGGCGCGCAAACCTATTATAACGCCACGCCGGATATAACCTGTTTAGGAAAAATTATCGGCGGTGGTTTGCCTGTTGGCGCTTATGGCGGAAAACGGGACATCATGCGATGTGTTGCCCCAGAAGGGGATGTCTATCAGGCAGGAACGTTATCCGGCAACCCGTTAGCCGTTACCGCAGGCATAACGACACTCAAAAAACTTGCTGAACCAGGGGTTTATGAGCAATTGGCGAACAGGGCCGCGGCTCTTGCAGACGGCATCGCCGAAGCAACCCAACAACACGGGATTGATGCATGGCATAGCCGAGTCGGTTCAATGTTGATGCTCTACTTCACACCGGAAACGGTTACGGATGCCGATGGCGCGCGCACCGCCGATACCGAACGGTACCGCCAATACTTCTGGGGACTCGTAGAACGCGGCGTTTATGTCGCACCCTCCCAGTTTGAAGCGGGATTCGTTTCCTTAGTTCATTCCGAAGACGATATCAACAAAACCGTTCAAGCCGCAACACAGGTATTGGCTCACCTCTAA

Transcript

ANN21871-RA

Protein

Uniprot

Uniprot term	Description
A5G9C0	Glutamate-1-semialdehyde 2,1-aminomutase OS=Geotalea uraniireducens (strain Rf4) OX=351605 GN=hemL PE=3 SV=1
C0ZAH4	Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=hemL2 PE=3 SV=1
Q3ACS9	Glutamate-1-semialdehyde 2,1-aminomutase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=hemL PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00490	ALAD	Delta-aminolevulinic acid dehydratase	Domain	Interproscan
PF00202	Aminotran_3	Aminotransferase class-III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001731	Family	Delta-aminolevulinic acid dehydratase	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR005814	Family	Aminotransferase class-III	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR049704	Conserved_site	Aminotransferases class-III pyridoxal-phosphate attachment site	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR004639	Family	Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase	Interproscan
IPR030656	Active_site	Delta-aminolevulinic acid dehydratase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43713	GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004655	Molecular Function	porphobilinogen synthase activity	Interproscan
GO:0033014	Biological Process	tetrapyrrole biosynthetic process	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0008483	Molecular Function	transaminase activity	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0042286	Molecular Function	glutamate-1-semialdehyde 2,1-aminomutase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01845	hemL; glutamate-1-semialdehyde 2,1-aminomutase	EC:5.4.3.8	Amino acid related enzymes	ko01007	deepkoala