Genomic Location: Scaffold_20__1_contigs__length_3961929:2693529...2694672
NR annotation: MYC76002.1, sigma-54-dependent Fis family transcriptional regulator [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families
| CDS |
| ANN21941-RA |
| Transcript |
| ANN21941-RA |
| Protein |
| ANN21941-RA |
| UniProt accession | Description |
|---|---|
| Q3K999 | Sigma54-dependent transcriptional regulator SfnR OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=sfnR PE=3 SV=1 |
| Q87MX7 | Regulatory protein LuxO OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=luxO PE=3 SV=1 |
| P12626 | Nitrogen fixation protein AnfA OS=Azotobacter vinelandii OX=354 GN=anfA PE=4 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0053446 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00158 all species → | Sigma54_activat | Sigma-54 interaction domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR025662 all species → | Binding_site | Sigma-54 interaction domain, ATP-binding site 1 | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR002078 all species → | Domain | RNA polymerase sigma factor 54 interaction domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32071 all species → | TRANSCRIPTIONAL REGULATORY PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008134 all species → | Molecular Function | transcription factor binding | Interproscan |
ANN21941-RA.
