Gene detail

Detailed information of ANN21965-RA in Montipora grisea

Genomic Location: Scaffold_20__1_contigs__length_3961929:3012332...3013201
NR annotation: RKU21111.1, succinate--CoA ligase subunit alpha [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P80865	Succinate--CoA ligase [ADP-forming] subunit alpha OS=Bacillus subtilis (strain 168) OX=224308 GN=sucD PE=1 SV=3
Q5HPU4	Succinate--CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=sucD PE=3 SV=1
Q8CPH4	Succinate--CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sucD PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02629	CoA_binding	CoA binding domain	Domain	Interproscan
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005810	Family	Succinyl-CoA ligase, alpha subunit	Interproscan
IPR033847	Conserved_site	ATP-citrate lyase/succinyl-CoA ligase, conserved site	Interproscan
IPR003781	Domain	CoA-binding	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR017440	Active_site	ATP-citrate lyase/succinyl-CoA ligase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11117	SUCCINYL-COA LIGASE SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004775	Molecular Function	succinate-CoA ligase (ADP-forming) activity	Interproscan
GO:0004776	Molecular Function	succinate-CoA ligase (GDP-forming) activity	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0009361	Cellular Component	succinate-CoA ligase complex (ADP-forming)	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01902	sucD; succinyl-CoA synthetase alpha subunit	EC:6.2.1.5	Carbon fixation pathways in prokaryotes	ko00720	deepkoala