Detailed information of ANN21967-RA in Montipora grisea

Genomic Location: Scaffold_20__1_contigs__length_3961929:3016290...3017522
NR annotation: RKU39408.1, ADP-forming succinate--CoA ligase subunit beta [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2IIC1Succinate--CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=sucC PE=3 SV=1
Q5HPU5Succinate--CoA ligase [ADP-forming] subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=sucC PE=3 SV=1
Q8CPH5Succinate--CoA ligase [ADP-forming] subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sucC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001643 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08442
all species →		ATP-grasp_2ATP-grasp domainDomainInterproscan
PF00549
all species →		Ligase_CoACoA-ligaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005809
all species →		FamilySuccinate--CoA ligase-like, beta subunitInterproscan
IPR013650
all species →		DomainATP-grasp fold, succinyl-CoA synthetase-typeInterproscan
IPR013815
all species →		Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR005811
all species →		DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan
IPR016102
all species →		Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR017866
all species →		Conserved_siteSuccinyl-CoA synthetase, beta subunit, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11815
all species →		SUCCINYL-COA SYNTHETASE BETA CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004775
all species →		Molecular Functionsuccinate-CoA ligase (ADP-forming) activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006099
all species →		Biological Processtricarboxylic acid cycleInterproscan
GO:0006104
all species →		Biological Processsuccinyl-CoA metabolic processInterproscan
GO:0042709
all species →		Cellular Componentsuccinate-CoA ligase complexInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01903sucC; succinyl-CoA synthetase beta subunitEC:6.2.1.5
Carbon fixation pathways in prokaryotesko00720deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP