Gene detail

Detailed information of ANN21967-RA in Montipora grisea

Genomic Location: Scaffold_20__1_contigs__length_3961929:3016290...3017522
NR annotation: RKU39408.1, ADP-forming succinate--CoA ligase subunit beta [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q2IIC1	Succinate--CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=sucC PE=3 SV=1
Q5HPU5	Succinate--CoA ligase [ADP-forming] subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=sucC PE=3 SV=1
Q8CPH5	Succinate--CoA ligase [ADP-forming] subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sucC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08442	ATP-grasp_2	ATP-grasp domain	Domain	Interproscan
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005809	Family	Succinate--CoA ligase-like, beta subunit	Interproscan
IPR013650	Domain	ATP-grasp fold, succinyl-CoA synthetase-type	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR017866	Conserved_site	Succinyl-CoA synthetase, beta subunit, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11815	SUCCINYL-COA SYNTHETASE BETA CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004775	Molecular Function	succinate-CoA ligase (ADP-forming) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006104	Biological Process	succinyl-CoA metabolic process	Interproscan
GO:0042709	Cellular Component	succinate-CoA ligase complex	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01903	sucC; succinyl-CoA synthetase beta subunit	EC:6.2.1.5	Carbon fixation pathways in prokaryotes	ko00720	deepkoala