Gene detail

Detailed information of ANN22037-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:42238876...42251250
NR annotation: CAH3040889.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A7T395	Spastin OS=Nematostella vectensis OX=45351 GN=v1g144095 PE=3 SV=2
B2RYN7	Spastin OS=Rattus norvegicus OX=10116 GN=Spast PE=1 SV=1
Q6NW58	Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017179	Family	Spastin	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR007330	Domain	MIT domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR050304	Family	Microtubule-severing AAA ATPase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23074	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008568	Molecular Function	microtubule severing ATPase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0015630	Cellular Component	microtubule cytoskeleton	Interproscan
GO:0140603	Molecular Function	obsolete ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13254	SPAST; spastin	EC:5.6.1.1	Cytoskeleton proteins	ko04812	deepkoala