Gene detail

Detailed information of ANN22083-RA in Leptoseris scabra

Genomic Location: Scaffold_4__1_contigs__length_45231618:42872655...42876805
NR annotation: CAH3040773.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
E9Q349	WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1
Q64LD2	WD repeat-containing protein 25 OS=Homo sapiens OX=9606 GN=WDR25 PE=1 SV=3
Q5I0B9	Autophagy-related protein 16 OS=Xenopus tropicalis OX=8364 GN=atg16 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08662	eIF2A	Eukaryotic translation initiation factor eIF2A	Repeat	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR013979	Domain	Translation initiation factor, beta propellor-like domain	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR053053	Family	WD repeat-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44566	TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24742	WDR25; WD repeat-containing protein 25	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala